Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
DDX39AO00148 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
DDX39AO00148 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.47□□□□□ -1.37
DDX39AO00148 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.47□□□□□ -1.37
DDX39AO00148 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
DDX39AO00148 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
DDX39AO00148 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
DDX39AO00148 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
DDX39AO00148 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
DDX39AO00148 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
DDX39AO00148 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
DDX39AO00148 RNA5SP46-201ENST00000362370 120 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 SNORA51.1-201ENST00000363243 140 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.46□□□□□ -1.38
DDX39AO00148 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
DDX39AO00148 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
DDX39AO00148 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
DDX39AO00148 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
DDX39AO00148 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
DDX39AO00148 RNA5SP251-201ENST00000410614 137 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 OR6E1P-201ENST00000414424 923 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 NIFKP3-201ENST00000417799 865 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 AC079355.1-201ENST00000421770 223 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 AC019205.1-201ENST00000421830 730 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 SETP9-201ENST00000423837 832 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.46□□□□□ -1.38
DDX39AO00148 AC096775.1-201ENST00000437724 448 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 OR7E116P-201ENST00000448529 957 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 AC079080.1-201ENST00000479841 822 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.46□□□□□ -1.38
DDX39AO00148 DUTP1-201ENST00000493631 470 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 AC105384.2-201ENST00000508433 640 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.46□□□□□ -1.38
DDX39AO00148 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.46□□□□□ -1.38
DDX39AO00148 AC114786.1-201ENST00000512892 1415 ntBASIC6.46□□□□□ -1.38
DDX39AO00148 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.46□□□□□ -1.38
DDX39AO00148 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.46□□□□□ -1.38
DDX39AO00148 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.46□□□□□ -1.38
DDX39AO00148 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.46□□□□□ -1.38
DDX39AO00148 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.46□□□□□ -1.38
DDX39AO00148 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.46□□□□□ -1.38
DDX39AO00148 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
DDX39AO00148 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.46□□□□□ -1.38
DDX39AO00148 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.46□□□□□ -1.38
DDX39AO00148 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.46□□□□□ -1.38
DDX39AO00148 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
DDX39AO00148 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
DDX39AO00148 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
DDX39AO00148 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
DDX39AO00148 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.45□□□□□ -1.38
DDX39AO00148 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
DDX39AO00148 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.45□□□□□ -1.38
DDX39AO00148 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
DDX39AO00148 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
DDX39AO00148 AL451046.1-201ENST00000406097 534 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 RPS6P23-201ENST00000413224 722 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 SDHDP6-201ENST00000414693 480 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.45□□□□□ -1.38
DDX39AO00148 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.45□□□□□ -1.38
DDX39AO00148 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.45□□□□□ -1.38
DDX39AO00148 FMO7P-201ENST00000436045 768 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.45□□□□□ -1.38
DDX39AO00148 Z84478.1-201ENST00000438230 1219 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.45□□□□□ -1.38
DDX39AO00148 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.45□□□□□ -1.38
DDX39AO00148 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.45□□□□□ -1.38
DDX39AO00148 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.45□□□□□ -1.38
DDX39AO00148 AC011411.1-201ENST00000509592 876 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.45□□□□□ -1.38
DDX39AO00148 TMEM97P2-201ENST00000517841 403 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.45□□□□□ -1.38
DDX39AO00148 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.45□□□□□ -1.38
DDX39AO00148 AC018659.2-201ENST00000624690 715 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 AL049767.1-202ENST00000637826 242 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
DDX39AO00148 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
DDX39AO00148 CR383656.5-201ENST00000547616 1340 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 MTCO1P11-201ENST00000429111 1528 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
DDX39AO00148 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
DDX39AO00148 ZNF101P1-201ENST00000435701 1720 ntBASIC6.45□□□□□ -1.38
DDX39AO00148 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.45□□□□□ -1.38
DDX39AO00148 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
DDX39AO00148 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.44□□□□□ -1.38
DDX39AO00148 YES1P1-201ENST00000418510 1628 ntBASIC6.44□□□□□ -1.38
DDX39AO00148 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
DDX39AO00148 MIPEPP2-201ENST00000422560 1819 ntBASIC6.44□□□□□ -1.38
DDX39AO00148 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.44□□□□□ -1.38
DDX39AO00148 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
DDX39AO00148 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
DDX39AO00148 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
DDX39AO00148 SNORD1C-201ENST00000363315 78 ntBASIC6.44□□□□□ -1.38
DDX39AO00148 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
DDX39AO00148 RPL23AP17-201ENST00000401064 499 ntBASIC6.44□□□□□ -1.38
DDX39AO00148 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.44□□□□□ -1.38
DDX39AO00148 CBX1P3-201ENST00000413296 527 ntBASIC6.44□□□□□ -1.38
DDX39AO00148 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.44□□□□□ -1.38
DDX39AO00148 LDHAP2-201ENST00000437325 985 ntBASIC6.44□□□□□ -1.38
DDX39AO00148 AC005297.1-201ENST00000444765 862 ntBASIC6.44□□□□□ -1.38
DDX39AO00148 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms