Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC188H7C350 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CCDC188H7C350 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC188H7C350 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CCDC188H7C350 ABCC13-202ENST00000463099 3842 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC188H7C350 AC004158.1-201ENST00000564508 4319 ntBASIC5.96□□□□□ -1.45
CCDC188H7C350 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
CCDC188H7C350 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC188H7C350 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.96□□□□□ -1.45
CCDC188H7C350 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC188H7C350 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.96□□□□□ -1.45
CCDC188H7C350 AC007342.9-201ENST00000623877 1385 ntBASIC5.96□□□□□ -1.45
CCDC188H7C350 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC188H7C350 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC188H7C350 MTCO1P8-201ENST00000416914 1523 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC188H7C350 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC188H7C350 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC188H7C350 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
CCDC188H7C350 RN7SKP81-201ENST00000365603 331 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 AC240504.1-201ENST00000395709 845 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 AC007068.1-201ENST00000396690 844 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC188H7C350 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC188H7C350 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC188H7C350 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC188H7C350 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC188H7C350 AC097523.2-201ENST00000435551 652 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 AL590399.4-201ENST00000436561 601 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 AC245291.3-201ENST00000443400 292 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 PPIAP7-201ENST00000454070 489 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 AC007386.1-201ENST00000455212 582 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC188H7C350 ATP5LP5-201ENST00000483050 299 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 NPM1P28-201ENST00000492269 840 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 AP002453.1-201ENST00000492327 668 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 OR52A4P-203ENST00000498233 1014 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC188H7C350 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC188H7C350 AC074255.1-201ENST00000511259 501 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC188H7C350 AC138832.1-201ENST00000522871 556 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 AP000620.1-201ENST00000527147 504 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CCDC188H7C350 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC188H7C350 AC122688.1-201ENST00000541494 223 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC188H7C350 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC188H7C350 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC188H7C350 AC010325.3-201ENST00000641084 394 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC188H7C350 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC188H7C350 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
CCDC188H7C350 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC188H7C350 AC012078.1-201ENST00000405035 1646 ntBASIC5.96□□□□□ -1.46
CCDC188H7C350 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC188H7C350 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC188H7C350 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC188H7C350 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 MIR188-201ENST00000385034 86 ntBASIC5.95□□□□□ -1.46
CCDC188H7C350 MIR130A-201ENST00000385274 89 ntBASIC5.95□□□□□ -1.46
CCDC188H7C350 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.95□□□□□ -1.46
CCDC188H7C350 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC188H7C350 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC188H7C350 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC188H7C350 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC188H7C350 NDUFB4P8-201ENST00000435351 367 ntBASIC5.95□□□□□ -1.46
CCDC188H7C350 EIF5AP4-201ENST00000441206 465 ntBASIC5.95□□□□□ -1.46
CCDC188H7C350 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC188H7C350 HMGN1P8-201ENST00000463578 288 ntBASIC5.95□□□□□ -1.46
CCDC188H7C350 AC099521.1-201ENST00000482557 334 ntBASIC5.95□□□□□ -1.46
CCDC188H7C350 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.95□□□□□ -1.46
CCDC188H7C350 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC188H7C350 DUTP1-201ENST00000493631 470 ntBASIC5.95□□□□□ -1.46
CCDC188H7C350 RNU6-551P-201ENST00000516661 103 ntBASIC5.95□□□□□ -1.46
CCDC188H7C350 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC188H7C350 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC188H7C350 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC188H7C350 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC188H7C350 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC188H7C350 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC188H7C350 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC188H7C350 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC188H7C350 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
CCDC188H7C350 MRPS21P8-201ENST00000569196 235 ntBASIC5.95□□□□□ -1.46
CCDC188H7C350 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC188H7C350 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC188H7C350 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC188H7C350 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CCDC188H7C350 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms