Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HCG18-244ENST00000602516 2890 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 OSBPL9P1-201ENST00000604744 1469 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 RNU6-185P-201ENST00000384421 107 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 Y_RNA.559-201ENST00000384686 107 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 GTF2IP23-201ENST00000423746 351 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 GAPDHP57-201ENST00000424400 585 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AL020997.1-201ENST00000446554 349 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC005002.1-201ENST00000447458 540 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 TVP23CP1-201ENST00000450317 639 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 RPL21P134-201ENST00000453468 483 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 MEF2AP1-201ENST00000454867 863 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 RN7SL180P-201ENST00000466769 294 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 TSACC-207ENST00000470342 601 ntTSL 2 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC007998.1-201ENST00000474156 672 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC091849.1-201ENST00000509920 121 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC006499.4-201ENST00000510947 694 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC008507.3-201ENST00000585753 472 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC008759.1-201ENST00000589783 983 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AP000811.1-201ENST00000603803 651 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 CLPTM1LP1-201ENST00000604519 484 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC092653.1-201ENST00000608509 531 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AL158063.1-201ENST00000615349 536 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC093225.1-201ENST00000506867 1408 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AP000776.1-201ENST00000530032 1663 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC129502.1-201ENST00000623261 1654 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 AC068860.1-201ENST00000623701 3736 ntBASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TMEM88BA6NKF7 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8□□□□□ -1.13
TMEM88BA6NKF7 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC8□□□□□ -1.13
TMEM88BA6NKF7 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8□□□□□ -1.13
TMEM88BA6NKF7 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
TMEM88BA6NKF7 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC8□□□□□ -1.13
TMEM88BA6NKF7 AP005901.5-201ENST00000545779 1796 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8□□□□□ -1.13
TMEM88BA6NKF7 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
TMEM88BA6NKF7 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
TMEM88BA6NKF7 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TMEM88BA6NKF7 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
TMEM88BA6NKF7 XRCC6P4-201ENST00000518193 2067 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8□□□□□ -1.13
TMEM88BA6NKF7 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8□□□□□ -1.13
TMEM88BA6NKF7 RNU6-244P-201ENST00000391028 104 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 AC092745.2-202ENST00000411880 369 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC8□□□□□ -1.13
TMEM88BA6NKF7 AL445213.1-201ENST00000412589 747 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC8□□□□□ -1.13
TMEM88BA6NKF7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC8□□□□□ -1.13
TMEM88BA6NKF7 RPL7AP14-201ENST00000424041 802 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 RPL21P43-201ENST00000425440 472 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 MTND6P12-201ENST00000428247 522 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 AC244035.1-201ENST00000430042 390 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 AL591503.2-201ENST00000442314 1005 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 DNAJC19P5-201ENST00000443295 316 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC8□□□□□ -1.13
TMEM88BA6NKF7 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8□□□□□ -1.13
TMEM88BA6NKF7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC8□□□□□ -1.13
TMEM88BA6NKF7 MTCO2P25-201ENST00000447065 681 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TMEM88BA6NKF7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC8□□□□□ -1.13
TMEM88BA6NKF7 RPL7P18-201ENST00000478965 734 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 AC098583.1-201ENST00000480875 255 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 AP002453.1-201ENST00000492327 668 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 AC107401.1-201ENST00000503426 685 ntBASIC8□□□□□ -1.13
TMEM88BA6NKF7 WBP1LP4-201ENST00000505043 344 ntBASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms