Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 NDUFS5P5-201ENST00000437256 321 ntBASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 AC079080.1-201ENST00000479841 822 ntBASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 TRIM51DP-201ENST00000529746 596 ntBASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 PCNAP4-201ENST00000532690 730 ntBASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 NPM1P42-201ENST00000560329 862 ntBASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 AC006115.2-201ENST00000596823 202 ntBASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 AC010615.3-201ENST00000597319 394 ntBASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4BQ9Y4P1 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 RN7SKP29-201ENST00000410957 272 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 HMGN1P20-201ENST00000411849 300 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 RPL12P16-201ENST00000431098 498 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AC096775.1-201ENST00000437724 448 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 HLA-DPA3-207ENST00000454398 229 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AC004129.2-201ENST00000457229 287 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AC093166.4-201ENST00000457867 318 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AL122020.1-201ENST00000472287 459 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 SNRPCP3-201ENST00000474888 476 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AC006539.1-201ENST00000481419 501 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 RN7SL57P-201ENST00000493687 290 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 NPM1P5-201ENST00000557228 838 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AL356801.1-201ENST00000559320 294 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AC125494.2-201ENST00000602431 657 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AC129915.3-201ENST00000634128 948 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AP004607.3-201ENST00000530354 3915 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AL513548.1-201ENST00000562904 1724 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 AL591135.1-201ENST00000401578 5914 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 DDX18P6-201ENST00000450119 1997 ntBASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4BQ9Y4P1 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 FBXL21-201ENST00000297158 1305 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 CUL4AP1-201ENST00000514750 1863 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 OR7E25P-201ENST00000344844 931 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AC023490.2-201ENST00000359859 470 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 RN7SKP78-201ENST00000364711 318 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 DEFA9P-201ENST00000433042 285 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 RSU1P1-201ENST00000453416 441 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms