Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC025262.3-201ENST00000623666 360 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC026523.2-201ENST00000625039 7739 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC090181.3-201ENST00000624777 1514 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC010266.2-201ENST00000564741 3255 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC008627.1-201ENST00000517511 1704 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 CASC19-260ENST00000641828 2001 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 GNL2P1-201ENST00000451274 2190 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC004076.2-201ENST00000620532 3323 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 RNU2-18P-201ENST00000411224 162 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 METTL15P3-201ENST00000415522 1221 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC113412.1-201ENST00000425840 504 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC099677.3-201ENST00000427081 395 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AL354893.1-201ENST00000433735 348 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 RPS7P3-201ENST00000443360 580 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 TIMM8BP2-201ENST00000445940 251 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 EEF1B2P3-201ENST00000447718 678 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AL445466.1-201ENST00000448432 357 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AL603882.1-201ENST00000463059 681 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 PFN1P6-201ENST00000476786 399 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC021006.1-201ENST00000489849 553 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC008629.2-201ENST00000503783 483 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AL158068.1-201ENST00000506116 616 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC018797.1-201ENST00000510791 255 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 RN7SKP35-201ENST00000517210 151 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC020937.1-201ENST00000519677 1013 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AL121594.2-201ENST00000541658 472 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC092332.1-201ENST00000563684 829 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 ZNF322P1-201ENST00000568013 1209 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC015712.7-201ENST00000615211 635 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC048341.3-201ENST00000619323 491 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC096708.4-201ENST00000620563 552 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC079776.5-201ENST00000641920 211 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AL158152.1-201ENST00000602652 1435 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 PSG10P-201ENST00000501199 1500 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AF287957.1-201ENST00000607368 1595 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 HSPD1P9-201ENST00000420325 1636 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 CUL4AP1-201ENST00000514750 1863 ntBASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
RHBDD3Q9Y3P4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 RNA5SP453-201ENST00000362503 119 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms