Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AC011933.2-201ENST00000578539 2790 ntBASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
KCNIP3Q9Y2W7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AP004607.3-201ENST00000530354 3915 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 SNORD94-201ENST00000386037 137 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 OSTCP4-201ENST00000424397 449 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 CXCR2P1-202ENST00000443392 1074 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 RPS23P9-201ENST00000448848 438 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 CTSLP6-201ENST00000458273 1002 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 SNORD125-201ENST00000459538 96 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 RPS10P28-201ENST00000480396 498 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 COX6B1P2-201ENST00000489624 230 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 MIR4472-2-201ENST00000582069 67 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AC092944.2-201ENST00000605443 889 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 AL645933.2-201ENST00000606743 1207 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 MIR6807-201ENST00000621968 92 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 TMEM30CP-203ENST00000637814 1035 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 LYARP1-201ENST00000436977 1501 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 CASC19-238ENST00000641523 1558 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 CASC19-246ENST00000641625 1606 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 ZNF710-AS1-202ENST00000620791 2133 ntBASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KCNIP3Q9Y2W7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC007938.2-201ENST00000604666 2634 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 RN7SKP145-201ENST00000363291 303 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 SNORA70.6-201ENST00000383934 134 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 RNA5SP91-201ENST00000390902 119 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 RN7SKP97-201ENST00000410966 333 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 PPIAP23-201ENST00000420099 497 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 PRUNEP1-201ENST00000425846 705 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms