Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC092376.2-201ENST00000622621 4116 ntBASIC4.7□□□□□ -1.66
RCL1Q9Y2P8 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RCL1Q9Y2P8 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RCL1Q9Y2P8 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.7□□□□□ -1.66
RCL1Q9Y2P8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC083899.1-201ENST00000454465 3819 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC092681.1-201ENST00000297369 291 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 RPL11P4-201ENST00000332269 436 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 RNA5SP485-201ENST00000365053 119 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 ZNF37CP-201ENST00000406795 241 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 SNORA79B-201ENST00000410557 148 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 HMGN2P27-201ENST00000427352 270 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 SNORD125-201ENST00000459538 96 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 RN7SL83P-201ENST00000468131 297 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 RN7SL655P-201ENST00000486087 298 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC008629.2-201ENST00000503783 483 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 RNA5SP230-201ENST00000517039 122 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AP002981.1-201ENST00000517692 975 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC137627.1-201ENST00000545761 289 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC037479.1-201ENST00000558361 625 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AL356608.1-201ENST00000610034 820 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AL035661.1-201ENST00000620459 1144 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC073488.6-201ENST00000632293 754 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 AC138627.1-204ENST00000641894 765 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 MFSD8-219ENST00000641228 2559 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.69□□□□□ -1.66
RCL1Q9Y2P8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 MTCO1P15-201ENST00000529569 1526 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 U3.7-201ENST00000363668 216 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AC092634.1-201ENST00000366505 199 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 RPS4XP5-201ENST00000419038 768 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AC006509.1-201ENST00000420788 634 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AP003385.1-201ENST00000426387 893 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AL445928.1-201ENST00000435545 222 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 NPM1P23-201ENST00000440193 849 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 BMS1P11-201ENST00000442351 885 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AC023141.8-201ENST00000442554 208 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AC009244.1-201ENST00000450566 258 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 BMS1P9-201ENST00000457640 885 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AL157777.1-201ENST00000468100 304 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 OR7E22P-201ENST00000478335 1035 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 RPS7P6-201ENST00000485777 579 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 MORF4L2P1-201ENST00000503761 858 ntBASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RCL1Q9Y2P8 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms