Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC020904.2-202ENST00000614660 1401 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 IL6STP1-201ENST00000346911 1020 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 RNY4P24-201ENST00000362735 96 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 SNORD65C-201ENST00000390962 71 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 TAF13P2-201ENST00000416876 286 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 FNDC3CP-201ENST00000420795 1155 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 DNAJA1P2-201ENST00000421360 1197 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AL022400.1-201ENST00000423946 935 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC009784.1-201ENST00000426484 460 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 CNOT7P1-201ENST00000429006 852 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 FTH1P20-201ENST00000434913 548 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 UBE2V1P8-201ENST00000437166 265 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 RAB9AP5-201ENST00000437794 597 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC091862.1-201ENST00000438016 1100 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 RAB9AP2-201ENST00000443911 597 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 RN7SL751P-201ENST00000473281 284 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 RN7SL37P-201ENST00000490461 307 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC113367.2-201ENST00000505749 160 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC108120.1-201ENST00000506543 991 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 RPL37P25-201ENST00000507308 276 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 HSD3BP3-201ENST00000514706 994 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 OR5D2P-201ENST00000524390 911 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 BGLT3-201ENST00000564523 994 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 RN7SL199P-201ENST00000578752 281 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 RN7SL656P-201ENST00000579044 281 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 RN7SL270P-201ENST00000579643 281 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 MIR4443-201ENST00000585052 53 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC083899.3-201ENST00000603413 594 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC068802.1-201ENST00000603420 732 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC128687.2-201ENST00000609657 566 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC097505.1-201ENST00000610199 565 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC072046.2-201ENST00000618366 268 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC127502.3-201ENST00000636170 1206 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 AC102941.1-201ENST00000567616 1537 ntBASIC8.65□□□□□ -1.02
ZC3H4Q9UPT8 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
ZC3H4Q9UPT8 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
ZC3H4Q9UPT8 AL359922.2-201ENST00000581788 3017 ntBASIC8.65□□□□□ -1.03
ZC3H4Q9UPT8 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
ZC3H4Q9UPT8 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AL590065.1-201ENST00000603371 4774 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AP000776.1-201ENST00000530032 1663 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AL356361.1-201ENST00000400943 1459 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 Y_RNA.70-201ENST00000362886 110 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 SNORD65-201ENST00000391079 73 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 RPL21P43-201ENST00000425440 472 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 RPS29P14-201ENST00000431518 171 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 ARMC4P1-201ENST00000438905 707 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 EEF1E1P1-201ENST00000446998 430 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC093392.2-201ENST00000450682 337 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 SNRPGP9-201ENST00000456025 225 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AKR1D1P1-201ENST00000457236 936 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC096751.1-202ENST00000502691 1067 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 MTCYBP44-201ENST00000514835 823 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 RN7SKP141-201ENST00000516167 338 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 IGKV3D-31-201ENST00000519131 281 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 OR8Q1P-201ENST00000526467 655 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 SDHCP4-201ENST00000532834 510 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AL845552.1-201ENST00000556820 323 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms