Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 OR7E116P-201ENST00000448529 957 ntBASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AC004129.2-201ENST00000457229 287 ntBASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 RPS23P2-201ENST00000463671 415 ntBASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 SCARNA18.1-201ENST00000516330 83 ntBASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AC121758.1-202ENST00000556917 658 ntBASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AP005119.1-201ENST00000580956 292 ntBASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AC011500.1-201ENST00000601963 469 ntBASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AC073869.7-201ENST00000640874 297 ntBASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 MTCO1P46-201ENST00000451639 1491 ntBASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 AC144833.1-201ENST00000567953 4089 ntBASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.42□□□□□ -1.54
THUMPD1Q9NXG2 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 PARP4P2-201ENST00000446672 3326 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 GNG5P5-201ENST00000420444 220 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 PSAT1P4-201ENST00000466500 526 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 RPL29P23-201ENST00000486188 442 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AC091874.2-201ENST00000505889 720 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 SETP21-201ENST00000514799 892 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 WBP1LP3-201ENST00000523033 208 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 CASC19-238ENST00000641523 1558 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
THUMPD1Q9NXG2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.4□□□□□ -1.54
THUMPD1Q9NXG2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
THUMPD1Q9NXG2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
THUMPD1Q9NXG2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
THUMPD1Q9NXG2 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
THUMPD1Q9NXG2 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms