Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC091193.1-201ENST00000604640 448 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 TUG1_1.1-201ENST00000610654 145 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 MIR6872-201ENST00000612981 62 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AL121873.1-201ENST00000616013 524 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 LINC01808-202ENST00000641680 1116 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AL136531.3-201ENST00000624378 3658 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC087392.3-202ENST00000358446 1754 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSU72Q9NP77 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SSU72Q9NP77 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SSU72Q9NP77 HSPD1P7-201ENST00000447985 1686 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC007485.2-201ENST00000623493 1667 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 CCDC162P-202ENST00000368966 6751 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSU72Q9NP77 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSU72Q9NP77 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 AL079342.2-201ENST00000403367 482 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AL356968.2-201ENST00000412769 1257 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 TAF13P2-201ENST00000416876 286 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC017104.2-201ENST00000417000 321 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSU72Q9NP77 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 RPL21P43-201ENST00000425440 472 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 AL592437.1-201ENST00000443781 492 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 USP9YP29-201ENST00000445112 563 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC096915.1-201ENST00000456185 512 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 RN7SL791P-201ENST00000467868 295 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC091959.2-201ENST00000477363 321 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC104971.1-201ENST00000495117 578 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 MTATP6P22-201ENST00000507369 598 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 FABP5P5-201ENST00000515537 406 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 RNU6-405P-201ENST00000516637 110 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 AP001000.1-201ENST00000526843 742 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AP000619.3-201ENST00000535634 1127 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC006530.1-201ENST00000555980 571 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 MIR4470-201ENST00000583453 72 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 AL391497.1-201ENST00000608671 547 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC008083.4-201ENST00000615076 444 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AL669830.1-201ENST00000621457 656 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC010435.1-201ENST00000623353 1177 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AL356596.1-201ENST00000624230 379 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 SAMMSON-214ENST00000641395 1264 ntBASIC6.91□□□□□ -1.3
SSU72Q9NP77 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SSU72Q9NP77 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSU72Q9NP77 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SSU72Q9NP77 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSU72Q9NP77 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SSU72Q9NP77 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms