Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
TM9SF3Q9HD45 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TM9SF3Q9HD45 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 GNG5P2-201ENST00000372054 207 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 MIR143-201ENST00000385300 106 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AL121835.1-201ENST00000404250 354 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AC234781.4-201ENST00000419384 244 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AC093155.2-201ENST00000420734 937 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 BX510359.3-201ENST00000422168 306 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 RPL7L1P3-201ENST00000455249 689 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AC073594.1-201ENST00000462065 364 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 SNRPCP3-201ENST00000474888 476 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AC090058.1-201ENST00000498788 435 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 ATP5LP3-201ENST00000514223 304 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AC010547.6-201ENST00000571789 193 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 MIR3189-201ENST00000578735 73 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 MIR4489-201ENST00000578869 62 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AP001496.3-201ENST00000580230 913 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AL021368.3-201ENST00000607119 578 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 CR788268.1-201ENST00000603931 1809 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AC092111.2-201ENST00000611627 1414 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AL359091.1-201ENST00000449048 1734 ntBASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM9SF3Q9HD45 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AL355834.1-201ENST00000556602 3965 ntBASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 SELENOWP1-201ENST00000322792 252 ntBASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 RNU2-22P-201ENST00000411266 212 ntBASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 BMS1P13-201ENST00000417301 885 ntBASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 KIF4CP-201ENST00000422742 1279 ntBASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 OR5W1P-201ENST00000423705 938 ntBASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AC126120.1-201ENST00000431082 470 ntBASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AL390879.1-201ENST00000439143 386 ntBASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 snoU13.29-201ENST00000459370 104 ntBASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 RN7SL57P-201ENST00000493687 290 ntBASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AC051619.2-201ENST00000559063 397 ntBASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TM9SF3Q9HD45 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 PDZK1P1-202ENST00000425209 1350 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 HDAC1P2-201ENST00000453661 1398 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms