Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MIR6811-201ENST00000620409 58 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 AC129778.1-202ENST00000623812 261 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 AL591379.1-207ENST00000635982 261 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.99□□□□□ -1.45
TRIM4Q9C037 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM4Q9C037 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM4Q9C037 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM4Q9C037 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM4Q9C037 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
TRIM4Q9C037 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM4Q9C037 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AL354854.1-201ENST00000455940 1363 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AP005432.1-201ENST00000580891 3485 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AL158827.1-201ENST00000416300 391 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC002127.1-201ENST00000421305 225 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC007562.1-201ENST00000421819 517 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 NPM1P22-201ENST00000427761 952 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM4Q9C037 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AL663074.2-201ENST00000440621 479 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC023274.2-201ENST00000445264 521 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 RBMY2AP-201ENST00000445405 1157 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 RBMY2CP-201ENST00000448575 1157 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 RBMY2DP-202ENST00000448881 1157 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 RBMY2BP-202ENST00000451071 1156 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 ACA64.1-201ENST00000459171 127 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 RPL32P9-201ENST00000487963 407 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC106800.3-201ENST00000511389 308 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 LINC00556-201ENST00000569603 412 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC018809.2-201ENST00000602436 3823 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC092944.2-201ENST00000605443 889 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC092681.3-201ENST00000609463 678 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 MIR6748-201ENST00000610433 71 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC004801.6-201ENST00000616571 978 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 MIR6085-201ENST00000618314 110 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM4Q9C037 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM4Q9C037 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC012078.1-201ENST00000405035 1646 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM4Q9C037 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM4Q9C037 RBPJP7-201ENST00000442803 1447 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 RBPJP5-201ENST00000449433 1447 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AOX3P-204ENST00000491025 2107 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM4Q9C037 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TRIM4Q9C037 AC007842.1-201ENST00000597336 2039 ntBASIC5.98□□□□□ -1.45
TRIM4Q9C037 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AC239868.2-201ENST00000564237 4527 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM4Q9C037 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 UBE2V1P14-201ENST00000415815 558 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AL157884.1-201ENST00000424561 454 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 KRT8P51-201ENST00000438938 274 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 AL645936.1-201ENST00000441979 518 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AC023141.9-201ENST00000458734 412 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 RPS23P1-201ENST00000491662 432 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AC114781.3-201ENST00000512083 142 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 RNA5SP340-201ENST00000517132 107 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 IGLV2-28-201ENST00000520681 304 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 AC112191.2-201ENST00000522428 333 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 AC138832.1-201ENST00000522871 556 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM4Q9C037 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AL359219.2-201ENST00000555184 348 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms