Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNU1-59P-201ENST00000364829 162 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 RNA5SP211-201ENST00000365516 117 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.8□□□□□ -1.48
PKP4Q99569 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.8□□□□□ -1.48
PKP4Q99569 RPS7P3-201ENST00000443360 580 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.8□□□□□ -1.48
PKP4Q99569 AC005077.1-201ENST00000449226 375 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.8□□□□□ -1.48
PKP4Q99569 PPIAP27-201ENST00000453800 265 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 AC023245.1-201ENST00000468501 517 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 AC092865.4-201ENST00000477936 615 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 RN7SL170P-201ENST00000487098 295 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.8□□□□□ -1.48
PKP4Q99569 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.8□□□□□ -1.48
PKP4Q99569 CYCSP38-201ENST00000559840 322 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 LINC00556-201ENST00000569603 412 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.8□□□□□ -1.48
PKP4Q99569 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.8□□□□□ -1.48
PKP4Q99569 MIR6809-201ENST00000612189 116 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 U1.25-201ENST00000614085 162 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.8□□□□□ -1.48
PKP4Q99569 U1.31-201ENST00000620022 160 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 AP002371.2-201ENST00000624450 503 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 IFIT1P1-201ENST00000400497 1449 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PKP4Q99569 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.8□□□□□ -1.48
PKP4Q99569 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 AC125336.1-201ENST00000508893 2827 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PKP4Q99569 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PKP4Q99569 QRSL1P1-201ENST00000400977 1540 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.79□□□□□ -1.48
PKP4Q99569 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PKP4Q99569 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PKP4Q99569 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.79□□□□□ -1.48
PKP4Q99569 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.79□□□□□ -1.48
PKP4Q99569 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.79□□□□□ -1.48
PKP4Q99569 AC099677.3-201ENST00000427081 395 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 AC069154.1-201ENST00000432914 542 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.79□□□□□ -1.48
PKP4Q99569 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.79□□□□□ -1.48
PKP4Q99569 Z83838.1-202ENST00000456225 839 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 MTND2P39-201ENST00000457230 764 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 CST12P-201ENST00000457644 362 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 AP002884.1-201ENST00000479691 655 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.79□□□□□ -1.48
PKP4Q99569 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.79□□□□□ -1.48
PKP4Q99569 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.79□□□□□ -1.48
PKP4Q99569 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 RPA2P1-201ENST00000556557 721 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.79□□□□□ -1.48
PKP4Q99569 AC005244.1-201ENST00000582566 339 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.79□□□□□ -1.48
PKP4Q99569 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.79□□□□□ -1.48
PKP4Q99569 AC007423.1-201ENST00000605009 627 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 AC108673.3-201ENST00000609183 335 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 AL352984.2-202ENST00000613699 155 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 AL031658.2-201ENST00000616850 651 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 AC245014.3-201ENST00000618589 347 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 AL138960.2-201ENST00000625145 535 ntBASIC5.79□□□□□ -1.48
PKP4Q99569 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.79□□□□□ -1.48
PKP4Q99569 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PKP4Q99569 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PKP4Q99569 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PKP4Q99569 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PKP4Q99569 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKP4Q99569 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PKP4Q99569 AC133552.1-201ENST00000569988 4007 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKP4Q99569 DNM1P47-203ENST00000571780 12667 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms