Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RPL41P2-201ENST00000544920 409 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 LSM3P2-201ENST00000551246 273 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC068408.1-201ENST00000577406 1144 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC127024.5-201ENST00000580085 462 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC099777.1-201ENST00000603779 1070 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC023206.1-201ENST00000605824 298 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC083964.1-201ENST00000607549 630 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 SOCS5P3-201ENST00000425115 1576 ntBASIC4.31□□□□□ -1.72
AP1S3Q96PC3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
AP1S3Q96PC3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 MAPK10-286ENST00000641208 8747 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 OR9K1P-201ENST00000326513 941 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC092634.1-201ENST00000366505 199 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 YWHAZP4-201ENST00000392459 708 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 SETP10-201ENST00000424368 814 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC096775.1-201ENST00000437724 448 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AL158214.1-201ENST00000444423 404 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 MEMO1P4-201ENST00000453590 386 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 RPS4XP17-201ENST00000479057 754 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 RN7SL104P-201ENST00000498686 293 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 ENPP7P11-201ENST00000505915 627 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC134698.1-201ENST00000511619 643 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 RNA5SP206-201ENST00000516703 121 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC021269.1-201ENST00000526860 705 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AL390877.1-201ENST00000605704 214 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 NANOGP3-201ENST00000605855 286 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 DDX18P6-201ENST00000450119 1997 ntBASIC4.3□□□□□ -1.72
AP1S3Q96PC3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.3□□□□□ -1.72
AP1S3Q96PC3 AP004607.3-201ENST00000530354 3915 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 THAP12P5-201ENST00000405864 2275 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms