Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AADACP1-206ENST00000561502 1193 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 ULK4P1-202ENST00000565174 503 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 RSL24D1P11-201ENST00000591045 491 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AL392112.1-201ENST00000605115 829 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC107075.1-201ENST00000613695 314 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC116165.3-201ENST00000614524 400 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 MIR6774-201ENST00000614651 70 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC102941.1-201ENST00000567616 1537 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 KARSP1-201ENST00000451871 1752 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 HSPD1P1-201ENST00000503199 1726 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
PTCHD1Q96NR3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 CR381670.1-201ENST00000624291 1693 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 Y_RNA.465-201ENST00000384293 102 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AL390774.1-201ENST00000411924 246 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AL773545.3-201ENST00000414297 706 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC006366.1-201ENST00000422002 759 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AL035458.1-201ENST00000433096 585 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AL354941.1-201ENST00000438600 464 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 MTND4P18-201ENST00000447010 465 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AL354714.5-201ENST00000450131 590 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 SRRM1P2-201ENST00000464531 1192 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC107015.1-201ENST00000466902 747 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 RN7SL379P-201ENST00000479912 293 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC107398.1-201ENST00000486904 505 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 RPS10P20-201ENST00000494130 463 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 PFN1P8-201ENST00000497012 543 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 PABPC1P1-201ENST00000506347 591 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 DPPA3P2-202ENST00000557188 1219 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 MIR5010-201ENST00000582846 120 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AL583832.1-201ENST00000603227 784 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AL645933.2-201ENST00000606743 1207 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AP002360.4-201ENST00000606980 481 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC090246.1-201ENST00000616499 426 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC073569.3-201ENST00000619055 682 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC018755.4-201ENST00000619715 454 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC109454.4-201ENST00000623411 649 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC010401.2-201ENST00000575137 4934 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 ATP5BP1-201ENST00000411980 1574 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms