Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL731534.1-201ENST00000434711 269 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 REREP2Y-201ENST00000439103 200 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 RNF2P1-201ENST00000442955 1010 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 ZNF619P1-201ENST00000446539 752 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 CR383658.1-201ENST00000514609 734 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 RNA5SP434-201ENST00000516647 121 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AC106785.3-201ENST00000564064 847 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AC079148.1-201ENST00000565944 819 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 BNIP3P31-201ENST00000604515 566 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AL645933.2-201ENST00000606743 1207 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AC120053.1-201ENST00000607706 736 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AL512652.1-201ENST00000619006 500 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AP003499.2-201ENST00000624100 483 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AL162377.2-201ENST00000624532 337 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AC018659.2-201ENST00000624690 715 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 AC110792.3-201ENST00000595906 1614 ntBASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP3Q96JB5 PPBPP2-201ENST00000513150 1362 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC011504.1-201ENST00000623331 4103 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC068769.1-201ENST00000474767 2426 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 CASC19-238ENST00000641523 1558 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 MTCO1P28-201ENST00000574177 1528 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 RN7SKP171-201ENST00000364417 303 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 RNU6-40P-201ENST00000384254 107 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AL121835.1-201ENST00000404250 354 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AL451046.1-201ENST00000406097 534 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 ARL5AP3-201ENST00000439327 386 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AL512593.1-201ENST00000444758 779 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 PPIAP7-201ENST00000454070 489 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AP002345.1-201ENST00000456493 928 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC092902.1-201ENST00000486999 259 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 RPL23AP40-201ENST00000487630 390 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC083795.1-201ENST00000491760 320 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC010374.2-201ENST00000512933 535 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AP000620.1-201ENST00000527147 504 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 MTND5P21-201ENST00000531961 522 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 GLYATL1P2-202ENST00000588046 902 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AL133247.2-201ENST00000603236 482 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 OR51C1P-201ENST00000608504 942 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 MIR6889-201ENST00000613185 59 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC111152.1-202ENST00000635848 339 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 CASC19-274ENST00000642018 970 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AP000432.2-201ENST00000624164 2048 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms