Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TOPBP1Q92547 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOPBP1Q92547 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC9.25□□□□□ -0.93
TOPBP1Q92547 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC9.25□□□□□ -0.93
TOPBP1Q92547 AC016712.1-201ENST00000431088 378 ntBASIC9.25□□□□□ -0.93
TOPBP1Q92547 GSTM5P1-201ENST00000434751 660 ntBASIC9.25□□□□□ -0.93
TOPBP1Q92547 EIF3KP3-201ENST00000514461 639 ntBASIC9.25□□□□□ -0.93
TOPBP1Q92547 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC9.25□□□□□ -0.93
TOPBP1Q92547 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC9.25□□□□□ -0.93
TOPBP1Q92547 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC9.25□□□□□ -0.93
TOPBP1Q92547 AC009117.1-201ENST00000563948 554 ntBASIC9.25□□□□□ -0.93
TOPBP1Q92547 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC9.25□□□□□ -0.93
TOPBP1Q92547 AC093799.2-201ENST00000610062 578 ntBASIC9.25□□□□□ -0.93
TOPBP1Q92547 AL627230.1-201ENST00000613077 211 ntBASIC9.25□□□□□ -0.93
TOPBP1Q92547 AL591926.8-201ENST00000616876 211 ntBASIC9.25□□□□□ -0.93
TOPBP1Q92547 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOPBP1Q92547 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOPBP1Q92547 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOPBP1Q92547 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOPBP1Q92547 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
TOPBP1Q92547 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOPBP1Q92547 AC011504.1-201ENST00000623331 4103 ntBASIC9.24□□□□□ -0.93
TOPBP1Q92547 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOPBP1Q92547 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TOPBP1Q92547 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC9.24□□□□□ -0.93
TOPBP1Q92547 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
TOPBP1Q92547 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOPBP1Q92547 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
TOPBP1Q92547 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TOPBP1Q92547 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOPBP1Q92547 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TOPBP1Q92547 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOPBP1Q92547 RNA5SP91-201ENST00000390902 119 ntBASIC9.24□□□□□ -0.93
TOPBP1Q92547 AL078599.1-201ENST00000402075 293 ntBASIC9.24□□□□□ -0.93
TOPBP1Q92547 AC019050.1-201ENST00000418508 492 ntBASIC9.24□□□□□ -0.93
TOPBP1Q92547 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC9.24□□□□□ -0.93
TOPBP1Q92547 AC091905.4-201ENST00000623432 202 ntBASIC9.24□□□□□ -0.93
TOPBP1Q92547 CASC22-202ENST00000628396 802 ntTSL 5 BASIC9.24□□□□□ -0.93
TOPBP1Q92547 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC9.24□□□□□ -0.93
TOPBP1Q92547 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
TOPBP1Q92547 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC9.24□□□□□ -0.93
TOPBP1Q92547 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOPBP1Q92547 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOPBP1Q92547 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TOPBP1Q92547 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TOPBP1Q92547 AC114876.1-201ENST00000490962 1366 ntBASIC9.23□□□□□ -0.93
TOPBP1Q92547 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9.23□□□□□ -0.93
TOPBP1Q92547 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TOPBP1Q92547 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TOPBP1Q92547 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TOPBP1Q92547 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TOPBP1Q92547 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC9.23□□□□□ -0.93
TOPBP1Q92547 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC9.23□□□□□ -0.93
TOPBP1Q92547 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC9.23□□□□□ -0.93
TOPBP1Q92547 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC9.23□□□□□ -0.93
TOPBP1Q92547 MTND6P2-201ENST00000512226 524 ntBASIC9.23□□□□□ -0.93
TOPBP1Q92547 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC9.23□□□□□ -0.93
TOPBP1Q92547 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TOPBP1Q92547 AC083809.1-201ENST00000615051 472 ntBASIC9.23□□□□□ -0.93
TOPBP1Q92547 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC9.23□□□□□ -0.93
TOPBP1Q92547 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC9.23□□□□□ -0.93
TOPBP1Q92547 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.23□□□□□ -0.93
TOPBP1Q92547 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC9.23□□□□□ -0.93
TOPBP1Q92547 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TOPBP1Q92547 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
TOPBP1Q92547 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TOPBP1Q92547 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TOPBP1Q92547 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TOPBP1Q92547 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC9.22□□□□□ -0.93
TOPBP1Q92547 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC9.22□□□□□ -0.93
TOPBP1Q92547 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TOPBP1Q92547 RN7SKP149-201ENST00000363008 344 ntBASIC9.22□□□□□ -0.93
TOPBP1Q92547 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC9.22□□□□□ -0.93
TOPBP1Q92547 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC9.22□□□□□ -0.93
TOPBP1Q92547 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC9.22□□□□□ -0.93
TOPBP1Q92547 RPL7P16-201ENST00000479738 738 ntBASIC9.22□□□□□ -0.93
TOPBP1Q92547 RN7SL205P-201ENST00000490174 284 ntBASIC9.22□□□□□ -0.93
TOPBP1Q92547 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC9.22□□□□□ -0.93
TOPBP1Q92547 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC9.22□□□□□ -0.93
TOPBP1Q92547 RN7SL52P-201ENST00000584271 284 ntBASIC9.22□□□□□ -0.93
TOPBP1Q92547 RN7SL722P-201ENST00000617780 284 ntBASIC9.22□□□□□ -0.93
TOPBP1Q92547 RN7SL565P-201ENST00000618246 284 ntBASIC9.22□□□□□ -0.93
TOPBP1Q92547 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TOPBP1Q92547 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TOPBP1Q92547 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
TOPBP1Q92547 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
TOPBP1Q92547 GDA-209ENST00000545168 5362 ntTSL 2 BASIC9.22□□□□□ -0.93
TOPBP1Q92547 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TOPBP1Q92547 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TOPBP1Q92547 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC9.22□□□□□ -0.93
TOPBP1Q92547 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
TOPBP1Q92547 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TOPBP1Q92547 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TOPBP1Q92547 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TOPBP1Q92547 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
TOPBP1Q92547 RNA5SP505-201ENST00000364748 108 ntBASIC9.21□□□□□ -0.93
TOPBP1Q92547 AC007568.1-201ENST00000422912 471 ntBASIC9.21□□□□□ -0.93
TOPBP1Q92547 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC9.21□□□□□ -0.93
TOPBP1Q92547 RPL7P56-201ENST00000429441 717 ntBASIC9.21□□□□□ -0.93
TOPBP1Q92547 AL513533.1-201ENST00000453728 415 ntBASIC9.21□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms