Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 VN1R20P-201ENST00000425215 966 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC114973.1-201ENST00000429057 632 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 LINC00328-2P-201ENST00000436585 219 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 ARL5AP3-201ENST00000439327 386 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 HMGN1P16-201ENST00000508308 283 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC138517.1-201ENST00000515724 568 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 snoU109.5-201ENST00000516231 132 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 OSBPL9P3-201ENST00000534523 595 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC245389.2-201ENST00000616023 576 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC242843.1-201ENST00000618702 573 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC079298.2-201ENST00000623885 459 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC000095.2-202ENST00000637415 154 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 TMEM30CP-203ENST00000637814 1035 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 Z95114.1-201ENST00000624264 14574 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 CUL4AP1-201ENST00000514750 1863 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 LINC01613-201ENST00000561476 2780 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AL132875.1-201ENST00000403623 949 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 MYL6P5-201ENST00000412707 459 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 RPS7P8-201ENST00000418311 581 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 OR51A6P-201ENST00000418680 1004 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 NMD3P2-201ENST00000421815 761 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 KRT8P51-201ENST00000438938 274 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 DNAJC19P5-201ENST00000443295 316 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 MOB1AP2-201ENST00000446060 614 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC016027.4-201ENST00000450866 277 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC099670.1-201ENST00000455141 783 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AP002345.1-201ENST00000456493 928 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 RN7SL836P-201ENST00000476140 296 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 RPL38P3-201ENST00000484463 213 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 RPL12P30-201ENST00000488389 499 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 UBE2V1P12-201ENST00000503954 474 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 SNORA74.1-201ENST00000516320 180 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 SNORA81.2-201ENST00000516868 170 ntBASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4AQ8WYN0 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms