Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 NPM1P38-201ENST00000403835 865 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 SNRPEP6-201ENST00000407465 277 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 MARK2P12-201ENST00000420129 585 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 HSFY7P-201ENST00000432672 318 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 GAPDHP48-201ENST00000436626 961 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 HSFY8P-201ENST00000437934 318 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AC009237.1-201ENST00000442127 744 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 XKRY2-201ENST00000442362 1093 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 HSFY5P-201ENST00000453726 309 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AL122020.1-201ENST00000472287 459 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AL136038.1-201ENST00000497246 351 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 RPS26P24-201ENST00000497656 331 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 HMGN1P15-201ENST00000513870 295 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 RNA5SP400-201ENST00000517155 111 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AC027308.1-201ENST00000517993 110 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AP000662.1-201ENST00000530952 487 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 PCNAP4-201ENST00000532690 730 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AC015922.4-201ENST00000612568 690 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AL662795.2-201ENST00000624252 3706 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 RPS3AP2-201ENST00000407190 754 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 MTND2P9-201ENST00000422293 931 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC083899.2-201ENST00000423285 1376 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AL592494.2-201ENST00000425455 1548 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 RBPJP7-201ENST00000442803 1447 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 RBPJP5-201ENST00000449433 1447 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC124945.1-201ENST00000485133 188 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC090022.1-201ENST00000546569 311 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC119501.1-201ENST00000603646 475 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC105148.1-201ENST00000604961 409 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 FAM27E4-201ENST00000605259 342 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AC027088.4-201ENST00000611559 1947 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AL445493.3-201ENST00000619568 477 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms