Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 RPS27P20-201ENST00000492051 246 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AL117692.1-201ENST00000494283 713 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 SNX18P24-201ENST00000505249 671 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC112484.3-201ENST00000505910 329 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC095052.1-201ENST00000509955 863 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 SNX18P25-201ENST00000510539 758 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 Y_RNA.710-201ENST00000516975 110 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC010376.1-201ENST00000522101 334 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC118942.1-201ENST00000529674 1035 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC061975.8-201ENST00000587058 721 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC111152.1-202ENST00000635848 339 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AP000547.3-204ENST00000588548 2523 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC078880.4-201ENST00000617627 1749 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AL353763.1-201ENST00000624467 1628 ntBASIC6.1□□□□□ -1.43
VRK3Q8IV63 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
VRK3Q8IV63 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VRK3Q8IV63 AC090181.3-201ENST00000624777 1514 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VRK3Q8IV63 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VRK3Q8IV63 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 MTND4P8-201ENST00000514997 1362 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VRK3Q8IV63 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC092692.1-201ENST00000623625 2595 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
VRK3Q8IV63 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 RNA5SP110-201ENST00000362638 115 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 RNU6-386P-201ENST00000362650 107 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 RNU6-792P-201ENST00000363490 107 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VRK3Q8IV63 Y_RNA.505-201ENST00000384489 102 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC119751.3-201ENST00000399720 670 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 YWHAZP6-201ENST00000399764 738 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 HYALP1-201ENST00000417674 1279 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 MUPP-201ENST00000438111 566 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AL645936.1-201ENST00000441979 518 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 GAPDHP23-201ENST00000444823 993 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC007383.1-201ENST00000445875 636 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AL590004.3-202ENST00000445883 451 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 ZNF886P-201ENST00000450781 723 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC005165.2-201ENST00000466070 380 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 RAP1BP2-201ENST00000478270 544 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC004263.1-201ENST00000479327 332 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC069306.1-201ENST00000507006 843 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 MTND4P2-201ENST00000507767 1203 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 RNA5SP400-201ENST00000517155 111 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 RPA2P3-201ENST00000533268 770 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AL356057.1-201ENST00000533798 831 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC074029.2-201ENST00000551045 634 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VRK3Q8IV63 AGGF1P6-201ENST00000569213 976 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AL078601.3-201ENST00000573303 535 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 RNU4ATAC-201ENST00000580972 127 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 DYNLL1P1-201ENST00000595442 269 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC119751.7-201ENST00000600494 245 ntBASIC6.09□□□□□ -1.43
VRK3Q8IV63 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 AL137246.2-201ENST00000613439 662 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms