Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.37□□□□□ -1.55
SCN1BQ07699 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN1BQ07699 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN1BQ07699 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
SCN1BQ07699 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.37□□□□□ -1.55
SCN1BQ07699 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.37□□□□□ -1.55
SCN1BQ07699 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN1BQ07699 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
SCN1BQ07699 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN1BQ07699 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN1BQ07699 AL121950.1-201ENST00000624993 2077 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 AC005224.3-201ENST00000584683 2140 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.36□□□□□ -1.55
SCN1BQ07699 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.36□□□□□ -1.55
SCN1BQ07699 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SCN1BQ07699 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN1BQ07699 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN1BQ07699 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN1BQ07699 RNU1-5P-201ENST00000362684 144 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.36□□□□□ -1.55
SCN1BQ07699 AC026310.1-201ENST00000396004 378 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 MIR1266-201ENST00000408125 84 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.36□□□□□ -1.55
SCN1BQ07699 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.36□□□□□ -1.55
SCN1BQ07699 HMGN2P27-201ENST00000427352 270 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 AL136231.1-201ENST00000429407 730 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SCN1BQ07699 AL645939.3-201ENST00000435408 225 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 PSMD8P1-201ENST00000436275 769 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.36□□□□□ -1.55
SCN1BQ07699 AP000936.3-201ENST00000438127 255 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 AC015983.1-201ENST00000441577 373 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.36□□□□□ -1.55
SCN1BQ07699 RN7SL352P-201ENST00000466002 277 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 PDCL3P4-201ENST00000489621 720 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.36□□□□□ -1.55
SCN1BQ07699 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.36□□□□□ -1.55
SCN1BQ07699 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.36□□□□□ -1.55
SCN1BQ07699 AC093664.1-201ENST00000511779 289 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SCN1BQ07699 RNU6-760P-201ENST00000516078 97 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.36□□□□□ -1.55
SCN1BQ07699 AP004609.2-201ENST00000532177 190 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.36□□□□□ -1.55
SCN1BQ07699 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.36□□□□□ -1.55
SCN1BQ07699 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.36□□□□□ -1.55
SCN1BQ07699 MIR4732-201ENST00000581873 76 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 AC024267.2-201ENST00000582737 417 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.36□□□□□ -1.55
SCN1BQ07699 AC009032.1-201ENST00000617574 431 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 AC074276.2-201ENST00000619891 348 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 CLUHP10-201ENST00000631979 980 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 MT-RNR2-201ENST00000387347 1559 ntBASIC5.36□□□□□ -1.55
SCN1BQ07699 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
SCN1BQ07699 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.36□□□□□ -1.55
SCN1BQ07699 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
SCN1BQ07699 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SCN1BQ07699 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SCN1BQ07699 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN1BQ07699 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN1BQ07699 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SCN1BQ07699 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
SCN1BQ07699 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SCN1BQ07699 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN1BQ07699 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.35□□□□□ -1.55
SCN1BQ07699 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN1BQ07699 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.35□□□□□ -1.55
SCN1BQ07699 MAPK10-328ENST00000641553 4009 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SCN1BQ07699 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 RNU1-84P-201ENST00000365447 164 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SCN1BQ07699 ZNF37CP-201ENST00000406795 241 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 MTND3P20-201ENST00000407663 186 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN1BQ07699 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN1BQ07699 AC079809.1-201ENST00000415468 276 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SCN1BQ07699 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN1BQ07699 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.35□□□□□ -1.55
SCN1BQ07699 MED28P4-201ENST00000433137 572 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms