Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC004815.1-201ENST00000484185 331 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AL079303.1-201ENST00000486611 463 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 RPS3AP22-201ENST00000488297 769 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AC034244.1-201ENST00000507687 207 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 MTND1P22-201ENST00000510572 951 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AC092593.2-201ENST00000513866 913 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 AC008429.2-201ENST00000523057 864 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.86□□□□□ -1.47
CLRN1P58418 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLRN1P58418 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.86□□□□□ -1.47
CLRN1P58418 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 SLC25A51P2-201ENST00000535708 889 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLRN1P58418 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.86□□□□□ -1.47
CLRN1P58418 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.86□□□□□ -1.47
CLRN1P58418 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.86□□□□□ -1.47
CLRN1P58418 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.86□□□□□ -1.47
CLRN1P58418 AP002906.1-201ENST00000603405 233 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AC002069.2-201ENST00000603580 883 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 RPS4XP21-201ENST00000603814 750 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AL157899.1-201ENST00000604110 936 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 NDUFB9P1-201ENST00000604683 510 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AL133507.1-201ENST00000605269 557 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AL158042.1-201ENST00000605338 460 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AL137000.1-201ENST00000610528 1244 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AC005514.1-201ENST00000623521 208 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AC018692.2-201ENST00000624130 348 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AC114546.4-201ENST00000624413 369 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AC061999.1-201ENST00000624454 177 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
CLRN1P58418 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.86□□□□□ -1.47
CLRN1P58418 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.86□□□□□ -1.47
CLRN1P58418 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CLRN1P58418 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CLRN1P58418 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.86□□□□□ -1.47
CLRN1P58418 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLRN1P58418 AL391262.1-201ENST00000556558 1992 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 AC022905.1-201ENST00000503430 3048 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.85□□□□□ -1.47
CLRN1P58418 KARSP1-201ENST00000451871 1752 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.85□□□□□ -1.47
CLRN1P58418 AC004023.1-201ENST00000561473 1744 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.85□□□□□ -1.47
CLRN1P58418 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 AC010132.4-201ENST00000569883 1368 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLRN1P58418 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLRN1P58418 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLRN1P58418 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 RNU4-92P-201ENST00000363783 136 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 RNA5SP442-201ENST00000365050 107 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLRN1P58418 RNU6-932P-201ENST00000391108 106 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 AC233289.1-201ENST00000403700 508 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 RN7SKP205-201ENST00000410999 307 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 MFSD13B-201ENST00000420133 1290 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.85□□□□□ -1.47
CLRN1P58418 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.85□□□□□ -1.47
CLRN1P58418 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 UBBP5-201ENST00000446970 266 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 PTENP1-201ENST00000447117 1215 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLRN1P58418 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.85□□□□□ -1.47
CLRN1P58418 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.85□□□□□ -1.47
CLRN1P58418 RN7SL372P-201ENST00000461982 298 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 AC099340.1-201ENST00000475247 599 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 RN7SL70P-201ENST00000478322 302 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 AC138409.2-202ENST00000507274 458 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.85□□□□□ -1.47
CLRN1P58418 RNA5SP303-201ENST00000516192 130 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.85□□□□□ -1.47
CLRN1P58418 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.85□□□□□ -1.47
CLRN1P58418 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.85□□□□□ -1.47
CLRN1P58418 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.85□□□□□ -1.47
CLRN1P58418 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.85□□□□□ -1.47
CLRN1P58418 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLRN1P58418 AC023080.1-201ENST00000551663 931 ntBASIC5.85□□□□□ -1.47
CLRN1P58418 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms