Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SNORD115-48-201ENST00000364764 76 ntBASIC6.39□□□□□ -1.39
COPAP53621 RNU1-59P-201ENST00000364829 162 ntBASIC6.39□□□□□ -1.39
COPAP53621 RN7SKP186-201ENST00000365371 303 ntBASIC6.39□□□□□ -1.39
COPAP53621 HMGA1P8-201ENST00000414130 321 ntBASIC6.39□□□□□ -1.39
COPAP53621 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.39□□□□□ -1.39
COPAP53621 RPS7P14-201ENST00000426405 583 ntBASIC6.39□□□□□ -1.39
COPAP53621 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 AC009963.4-201ENST00000448535 339 ntBASIC6.39□□□□□ -1.39
COPAP53621 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.39□□□□□ -1.39
COPAP53621 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.39□□□□□ -1.39
COPAP53621 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.39□□□□□ -1.39
COPAP53621 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.39□□□□□ -1.39
COPAP53621 RN7SL714P-201ENST00000487050 298 ntBASIC6.39□□□□□ -1.39
COPAP53621 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.39□□□□□ -1.39
COPAP53621 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COPAP53621 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.39□□□□□ -1.39
COPAP53621 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.39□□□□□ -1.39
COPAP53621 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.39□□□□□ -1.39
COPAP53621 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.39□□□□□ -1.39
COPAP53621 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.39□□□□□ -1.39
COPAP53621 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 AC008147.3-201ENST00000548666 354 ntBASIC6.39□□□□□ -1.39
COPAP53621 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COPAP53621 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.39□□□□□ -1.39
COPAP53621 AC007494.1-201ENST00000562293 760 ntBASIC6.39□□□□□ -1.39
COPAP53621 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.39□□□□□ -1.39
COPAP53621 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 AC008507.3-201ENST00000585753 472 ntBASIC6.39□□□□□ -1.39
COPAP53621 AC067773.1-201ENST00000603284 1094 ntBASIC6.39□□□□□ -1.39
COPAP53621 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 AC242628.1-201ENST00000606810 391 ntBASIC6.39□□□□□ -1.39
COPAP53621 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.39□□□□□ -1.39
COPAP53621 AC110792.4-201ENST00000609843 298 ntBASIC6.39□□□□□ -1.39
COPAP53621 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 AC092266.1-201ENST00000610958 165 ntBASIC6.39□□□□□ -1.39
COPAP53621 U1.25-201ENST00000614085 162 ntBASIC6.39□□□□□ -1.39
COPAP53621 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
COPAP53621 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 AC022306.3-201ENST00000619930 550 ntBASIC6.39□□□□□ -1.39
COPAP53621 U1.31-201ENST00000620022 160 ntBASIC6.39□□□□□ -1.39
COPAP53621 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COPAP53621 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 AL354854.1-201ENST00000455940 1363 ntBASIC6.39□□□□□ -1.39
COPAP53621 AC009501.3-201ENST00000605001 1352 ntBASIC6.39□□□□□ -1.39
COPAP53621 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.39□□□□□ -1.39
COPAP53621 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 AC011455.2-201ENST00000599320 3336 ntBASIC6.39□□□□□ -1.39
COPAP53621 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.39□□□□□ -1.39
COPAP53621 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COPAP53621 AL133243.2-201ENST00000610331 1621 ntBASIC6.39□□□□□ -1.39
COPAP53621 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.39□□□□□ -1.39
COPAP53621 MTND5P23-201ENST00000430812 1655 ntBASIC6.39□□□□□ -1.39
COPAP53621 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COPAP53621 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
COPAP53621 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.38□□□□□ -1.39
COPAP53621 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COPAP53621 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.38□□□□□ -1.39
COPAP53621 PTP4A1P1-201ENST00000420539 515 ntBASIC6.38□□□□□ -1.39
COPAP53621 MTND4P24-201ENST00000424002 397 ntBASIC6.38□□□□□ -1.39
COPAP53621 NAP1L4P2-201ENST00000425958 899 ntBASIC6.38□□□□□ -1.39
COPAP53621 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.38□□□□□ -1.39
COPAP53621 IGLV3-4-201ENST00000432300 244 ntBASIC6.38□□□□□ -1.39
COPAP53621 MTND2P21-201ENST00000436242 1042 ntBASIC6.38□□□□□ -1.39
COPAP53621 SNRPFP2-201ENST00000440710 251 ntBASIC6.38□□□□□ -1.39
COPAP53621 RPL6P30-201ENST00000443382 862 ntBASIC6.38□□□□□ -1.39
COPAP53621 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.38□□□□□ -1.39
COPAP53621 RAB28P3-201ENST00000448325 597 ntBASIC6.38□□□□□ -1.39
COPAP53621 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.38□□□□□ -1.39
COPAP53621 PPIAP27-201ENST00000453800 265 ntBASIC6.38□□□□□ -1.39
COPAP53621 PPIAP7-201ENST00000454070 489 ntBASIC6.38□□□□□ -1.39
COPAP53621 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.38□□□□□ -1.39
COPAP53621 UGT2A3P7-201ENST00000510485 734 ntBASIC6.38□□□□□ -1.39
COPAP53621 COX6B1P4-201ENST00000519826 484 ntBASIC6.38□□□□□ -1.39
COPAP53621 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.38□□□□□ -1.39
COPAP53621 TRIM77BP-201ENST00000524985 1119 ntBASIC6.38□□□□□ -1.39
COPAP53621 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.38□□□□□ -1.39
COPAP53621 AP000620.1-201ENST00000527147 504 ntBASIC6.38□□□□□ -1.39
COPAP53621 AC027369.2-201ENST00000528030 440 ntBASIC6.38□□□□□ -1.39
COPAP53621 NANOGNBP2-201ENST00000544753 553 ntBASIC6.38□□□□□ -1.39
COPAP53621 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.38□□□□□ -1.39
COPAP53621 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COPAP53621 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COPAP53621 AC005776.1-201ENST00000603164 290 ntBASIC6.38□□□□□ -1.39
COPAP53621 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COPAP53621 AC004801.6-201ENST00000616571 978 ntBASIC6.38□□□□□ -1.39
COPAP53621 FAM27E2-201ENST00000619668 403 ntBASIC6.38□□□□□ -1.39
COPAP53621 AC024884.1-201ENST00000620583 399 ntBASIC6.38□□□□□ -1.39
COPAP53621 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.38□□□□□ -1.39
COPAP53621 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.38□□□□□ -1.39
COPAP53621 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.38□□□□□ -1.39
COPAP53621 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COPAP53621 MTCO1P28-201ENST00000574177 1528 ntBASIC6.38□□□□□ -1.39
COPAP53621 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COPAP53621 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
COPAP53621 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COPAP53621 AC105235.1-201ENST00000623208 1816 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms