Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.91□□□□□ -1.3
NUP98P52948 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.91□□□□□ -1.3
NUP98P52948 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NUP98P52948 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
NUP98P52948 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.91□□□□□ -1.3
NUP98P52948 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP98P52948 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP98P52948 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.91□□□□□ -1.3
NUP98P52948 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP98P52948 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.91□□□□□ -1.3
NUP98P52948 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.91□□□□□ -1.3
NUP98P52948 FTH1P8-201ENST00000498161 514 ntBASIC6.91□□□□□ -1.3
NUP98P52948 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.91□□□□□ -1.3
NUP98P52948 AP000676.2-201ENST00000529711 301 ntBASIC6.91□□□□□ -1.3
NUP98P52948 OR5D15P-201ENST00000531671 942 ntBASIC6.91□□□□□ -1.3
NUP98P52948 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.91□□□□□ -1.3
NUP98P52948 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.91□□□□□ -1.3
NUP98P52948 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP98P52948 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.91□□□□□ -1.3
NUP98P52948 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.91□□□□□ -1.3
NUP98P52948 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
NUP98P52948 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.91□□□□□ -1.3
NUP98P52948 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.91□□□□□ -1.3
NUP98P52948 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP98P52948 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.91□□□□□ -1.3
NUP98P52948 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
NUP98P52948 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUP98P52948 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUP98P52948 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NUP98P52948 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NUP98P52948 RN7SKP6-201ENST00000364795 319 ntBASIC6.9□□□□□ -1.3
NUP98P52948 SNORD56.6-201ENST00000384569 71 ntBASIC6.9□□□□□ -1.3
NUP98P52948 RPS27P18-201ENST00000431701 247 ntBASIC6.9□□□□□ -1.3
NUP98P52948 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP98P52948 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.9□□□□□ -1.3
NUP98P52948 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.9□□□□□ -1.3
NUP98P52948 RN7SL591P-201ENST00000496150 292 ntBASIC6.9□□□□□ -1.3
NUP98P52948 AC021106.1-201ENST00000509020 1058 ntBASIC6.9□□□□□ -1.3
NUP98P52948 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NUP98P52948 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.9□□□□□ -1.3
NUP98P52948 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.9□□□□□ -1.3
NUP98P52948 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.9□□□□□ -1.3
NUP98P52948 AP000769.2-201ENST00000602344 396 ntBASIC6.9□□□□□ -1.3
NUP98P52948 Mico1.1-201ENST00000611698 204 ntBASIC6.9□□□□□ -1.3
NUP98P52948 AC123769.2-201ENST00000624332 5984 ntBASIC6.9□□□□□ -1.3
NUP98P52948 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP98P52948 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP98P52948 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUP98P52948 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUP98P52948 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP98P52948 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP98P52948 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
NUP98P52948 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.9□□□□□ -1.31
NUP98P52948 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.9□□□□□ -1.31
NUP98P52948 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
NUP98P52948 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP98P52948 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.9□□□□□ -1.31
NUP98P52948 MIR550A3-201ENST00000390735 95 ntBASIC6.9□□□□□ -1.31
NUP98P52948 AL121977.1-201ENST00000401636 979 ntBASIC6.9□□□□□ -1.31
NUP98P52948 RPL23AP18-201ENST00000416139 468 ntBASIC6.9□□□□□ -1.31
NUP98P52948 AZGP1P2-201ENST00000454506 345 ntBASIC6.9□□□□□ -1.31
NUP98P52948 MIR4436B2-201ENST00000581415 91 ntBASIC6.9□□□□□ -1.31
NUP98P52948 MIR4436B1-201ENST00000583272 91 ntBASIC6.9□□□□□ -1.31
NUP98P52948 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.9□□□□□ -1.31
NUP98P52948 AC116651.1-201ENST00000609724 556 ntBASIC6.9□□□□□ -1.31
NUP98P52948 MAPK10-350ENST00000641777 965 ntBASIC6.9□□□□□ -1.31
NUP98P52948 AC011933.2-201ENST00000578539 2790 ntBASIC6.89□□□□□ -1.31
NUP98P52948 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUP98P52948 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUP98P52948 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUP98P52948 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUP98P52948 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUP98P52948 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
NUP98P52948 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUP98P52948 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUP98P52948 AC104162.1-201ENST00000430831 2382 ntBASIC6.89□□□□□ -1.31
NUP98P52948 RNU1-43P-201ENST00000365052 165 ntBASIC6.89□□□□□ -1.31
NUP98P52948 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.89□□□□□ -1.31
NUP98P52948 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.89□□□□□ -1.31
NUP98P52948 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.89□□□□□ -1.31
NUP98P52948 RPL12P3-201ENST00000440080 396 ntBASIC6.89□□□□□ -1.31
NUP98P52948 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NUP98P52948 AC079080.1-201ENST00000479841 822 ntBASIC6.89□□□□□ -1.31
NUP98P52948 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.89□□□□□ -1.31
NUP98P52948 RN7SL97P-201ENST00000486780 299 ntBASIC6.89□□□□□ -1.31
NUP98P52948 RN7SL447P-201ENST00000494711 245 ntBASIC6.89□□□□□ -1.31
NUP98P52948 SNRPCP2-201ENST00000504370 475 ntBASIC6.89□□□□□ -1.31
NUP98P52948 ZNF969P-201ENST00000510345 2341 ntBASIC6.89□□□□□ -1.31
NUP98P52948 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms