Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNGTTP1-201ENST00000420965 728 ntBASIC6.2□□□□□ -1.42
CASP4P49662 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.2□□□□□ -1.42
CASP4P49662 AC002069.1-201ENST00000429649 1159 ntBASIC6.2□□□□□ -1.42
CASP4P49662 MEMO1P4-201ENST00000453590 386 ntBASIC6.2□□□□□ -1.42
CASP4P49662 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.2□□□□□ -1.42
CASP4P49662 AC084754.1-201ENST00000463466 464 ntBASIC6.2□□□□□ -1.42
CASP4P49662 PSMA2P2-201ENST00000504319 686 ntBASIC6.2□□□□□ -1.42
CASP4P49662 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.2□□□□□ -1.42
CASP4P49662 GAPDHP62-201ENST00000515313 990 ntBASIC6.2□□□□□ -1.42
CASP4P49662 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.2□□□□□ -1.42
CASP4P49662 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.2□□□□□ -1.42
CASP4P49662 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.2□□□□□ -1.42
CASP4P49662 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.2□□□□□ -1.42
CASP4P49662 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.2□□□□□ -1.42
CASP4P49662 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.2□□□□□ -1.42
CASP4P49662 NANOGP3-201ENST00000605855 286 ntBASIC6.2□□□□□ -1.42
CASP4P49662 AC015982.1-201ENST00000608113 465 ntBASIC6.2□□□□□ -1.42
CASP4P49662 RN7SL544P-201ENST00000617232 284 ntBASIC6.2□□□□□ -1.42
CASP4P49662 RN7SL763P-201ENST00000620922 284 ntBASIC6.2□□□□□ -1.42
CASP4P49662 AC009120.7-201ENST00000623452 780 ntBASIC6.2□□□□□ -1.42
CASP4P49662 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CASP4P49662 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CASP4P49662 PWAR1-201ENST00000624188 2414 ntBASIC6.2□□□□□ -1.42
CASP4P49662 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CASP4P49662 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.2□□□□□ -1.42
CASP4P49662 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.2□□□□□ -1.42
CASP4P49662 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CASP4P49662 AC090220.1-201ENST00000593078 1699 ntBASIC6.2□□□□□ -1.42
CASP4P49662 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP4P49662 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP4P49662 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.19□□□□□ -1.42
CASP4P49662 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CASP4P49662 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.19□□□□□ -1.42
CASP4P49662 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP4P49662 AC139426.3-201ENST00000605648 2059 ntBASIC6.19□□□□□ -1.42
CASP4P49662 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP4P49662 AC106872.5-201ENST00000508856 1416 ntBASIC6.19□□□□□ -1.42
CASP4P49662 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.19□□□□□ -1.42
CASP4P49662 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.19□□□□□ -1.42
CASP4P49662 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.19□□□□□ -1.42
CASP4P49662 RN7SKP17-201ENST00000411242 351 ntBASIC6.19□□□□□ -1.42
CASP4P49662 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.19□□□□□ -1.42
CASP4P49662 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.19□□□□□ -1.42
CASP4P49662 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CASP4P49662 SUMO2P3-201ENST00000438311 288 ntBASIC6.19□□□□□ -1.42
CASP4P49662 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CASP4P49662 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.19□□□□□ -1.42
CASP4P49662 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.19□□□□□ -1.42
CASP4P49662 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.19□□□□□ -1.42
CASP4P49662 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.19□□□□□ -1.42
CASP4P49662 SNORD46.2-201ENST00000516021 102 ntBASIC6.19□□□□□ -1.42
CASP4P49662 MRPS16P1-201ENST00000523462 412 ntBASIC6.19□□□□□ -1.42
CASP4P49662 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.19□□□□□ -1.42
CASP4P49662 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.19□□□□□ -1.42
CASP4P49662 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.19□□□□□ -1.42
CASP4P49662 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.19□□□□□ -1.42
CASP4P49662 AC025857.2-201ENST00000602711 238 ntBASIC6.19□□□□□ -1.42
CASP4P49662 AL353729.2-201ENST00000605859 1249 ntBASIC6.19□□□□□ -1.42
CASP4P49662 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP4P49662 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.19□□□□□ -1.42
CASP4P49662 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP4P49662 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP4P49662 AC087516.1-201ENST00000561236 2428 ntBASIC6.19□□□□□ -1.42
CASP4P49662 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CASP4P49662 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CASP4P49662 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CASP4P49662 TTC41P-205ENST00000551270 3963 ntBASIC6.19□□□□□ -1.42
CASP4P49662 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.19□□□□□ -1.42
CASP4P49662 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CASP4P49662 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.19□□□□□ -1.42
CASP4P49662 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.18□□□□□ -1.42
CASP4P49662 UGT2B24P-201ENST00000514441 1597 ntBASIC6.18□□□□□ -1.42
CASP4P49662 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CASP4P49662 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CASP4P49662 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.18□□□□□ -1.42
CASP4P49662 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASP4P49662 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.18□□□□□ -1.42
CASP4P49662 SRRM1P3-201ENST00000426911 2678 ntBASIC6.18□□□□□ -1.42
CASP4P49662 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASP4P49662 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASP4P49662 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.18□□□□□ -1.42
CASP4P49662 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CASP4P49662 MSL3P1-202ENST00000440028 1468 ntBASIC6.18□□□□□ -1.42
CASP4P49662 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASP4P49662 OR56A4-201ENST00000330728 1209 ntBASIC6.18□□□□□ -1.42
CASP4P49662 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASP4P49662 MIR375-201ENST00000362103 64 ntBASIC6.18□□□□□ -1.42
CASP4P49662 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.18□□□□□ -1.42
CASP4P49662 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.18□□□□□ -1.42
CASP4P49662 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.18□□□□□ -1.42
CASP4P49662 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.18□□□□□ -1.42
CASP4P49662 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CASP4P49662 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.18□□□□□ -1.42
CASP4P49662 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.18□□□□□ -1.42
CASP4P49662 AC022215.1-201ENST00000481770 362 ntBASIC6.18□□□□□ -1.42
CASP4P49662 DUTP7-201ENST00000507982 486 ntBASIC6.18□□□□□ -1.42
CASP4P49662 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.18□□□□□ -1.42
CASP4P49662 AC022826.1-201ENST00000519383 805 ntBASIC6.18□□□□□ -1.42
CASP4P49662 AC136777.2-201ENST00000522979 358 ntBASIC6.18□□□□□ -1.42
CASP4P49662 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms