Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC245014.3-201ENST00000618589 347 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CR1P49238 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CR1P49238 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CR1P49238 AP003072.5-201ENST00000623872 773 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CR1P49238 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CR1P49238 AL034546.1-201ENST00000623740 3693 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CX3CR1P49238 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.09□□□□□ -1.59
CX3CR1P49238 MFSD8-219ENST00000641228 2559 ntBASIC5.09□□□□□ -1.6
CX3CR1P49238 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 AL161912.4-201ENST00000623889 2468 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 MFSD8-239ENST00000641590 2479 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.08□□□□□ -1.6
CX3CR1P49238 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.08□□□□□ -1.6
CX3CR1P49238 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CX3CR1P49238 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CX3CR1P49238 RNA5SP91-201ENST00000390902 119 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 VN1R21P-201ENST00000426703 765 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CR1P49238 TUBB4BP6-201ENST00000437576 479 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 TIMM8BP2-201ENST00000445940 251 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 MEMO1P4-201ENST00000453590 386 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 GEMIN2P1-201ENST00000454246 752 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 AC021006.1-201ENST00000489849 553 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 AC105384.2-201ENST00000508433 640 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.08□□□□□ -1.6
CX3CR1P49238 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.08□□□□□ -1.6
CX3CR1P49238 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CR1P49238 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CR1P49238 RPA2P1-201ENST00000556557 721 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CR1P49238 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CR1P49238 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.08□□□□□ -1.6
CX3CR1P49238 AC016839.1-201ENST00000578162 867 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 AC005244.1-201ENST00000582566 339 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.08□□□□□ -1.6
CX3CR1P49238 AC091167.5-201ENST00000605689 894 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 AL136131.3-201ENST00000607600 188 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.08□□□□□ -1.6
CX3CR1P49238 CASC19-274ENST00000642018 970 ntBASIC5.08□□□□□ -1.6
CX3CR1P49238 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CX3CR1P49238 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CX3CR1P49238 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CR1P49238 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
CX3CR1P49238 AC090181.3-201ENST00000624777 1514 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 PROS2P-201ENST00000474651 1951 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CX3CR1P49238 AC093225.1-201ENST00000506867 1408 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CX3CR1P49238 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CX3CR1P49238 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.07□□□□□ -1.6
CX3CR1P49238 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CX3CR1P49238 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CX3CR1P49238 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.07□□□□□ -1.6
CX3CR1P49238 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CX3CR1P49238 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CX3CR1P49238 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.07□□□□□ -1.6
CX3CR1P49238 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.07□□□□□ -1.6
CX3CR1P49238 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.07□□□□□ -1.6
CX3CR1P49238 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.07□□□□□ -1.6
CX3CR1P49238 AC242426.1-201ENST00000435270 960 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 PNKDP1-201ENST00000435914 430 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.07□□□□□ -1.6
CX3CR1P49238 ATP5LP2-201ENST00000440646 311 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.07□□□□□ -1.6
CX3CR1P49238 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.07□□□□□ -1.6
CX3CR1P49238 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.07□□□□□ -1.6
CX3CR1P49238 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.07□□□□□ -1.6
CX3CR1P49238 VN1R96P-201ENST00000446052 858 ntBASIC5.07□□□□□ -1.6
CX3CR1P49238 EEF1B2P3-201ENST00000447718 678 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms