Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AP000919.1-202ENST00000581139 1264 ntBASIC5.45□□□□□ -1.54
SOX2P48431 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX2P48431 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 RPL29P33-201ENST00000587474 316 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.45□□□□□ -1.54
SOX2P48431 RPP40P2-201ENST00000603596 712 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AC098935.2-201ENST00000604222 466 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AC114477.1-201ENST00000605097 605 ntBASIC5.45□□□□□ -1.54
SOX2P48431 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.45□□□□□ -1.54
SOX2P48431 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
SOX2P48431 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
SOX2P48431 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SOX2P48431 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX2P48431 AC027575.3-201ENST00000583058 2747 ntBASIC5.45□□□□□ -1.54
SOX2P48431 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.45□□□□□ -1.54
SOX2P48431 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
SOX2P48431 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX2P48431 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SOX2P48431 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX2P48431 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX2P48431 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.44□□□□□ -1.54
SOX2P48431 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.44□□□□□ -1.54
SOX2P48431 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
SOX2P48431 OR2W4P-201ENST00000406496 926 ntBASIC5.44□□□□□ -1.54
SOX2P48431 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 CDY17P-201ENST00000414121 1282 ntBASIC5.44□□□□□ -1.54
SOX2P48431 UBE2V1P9-201ENST00000414760 368 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AL672212.1-201ENST00000422246 400 ntBASIC5.44□□□□□ -1.54
SOX2P48431 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.44□□□□□ -1.54
SOX2P48431 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.44□□□□□ -1.54
SOX2P48431 CDY8P-201ENST00000428380 1279 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 ELOCP11-201ENST00000436690 332 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AL390879.1-201ENST00000439143 386 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AC083855.1-201ENST00000440041 258 ntBASIC5.44□□□□□ -1.54
SOX2P48431 DNAJC19P5-201ENST00000443295 316 ntBASIC5.44□□□□□ -1.54
SOX2P48431 ELOCP16-201ENST00000444494 332 ntBASIC5.44□□□□□ -1.54
SOX2P48431 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 AL020997.1-201ENST00000446554 349 ntBASIC5.44□□□□□ -1.54
SOX2P48431 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 CDY20P-201ENST00000447528 1279 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.44□□□□□ -1.54
SOX2P48431 AL009048.1-201ENST00000450437 298 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AC022080.2-201ENST00000452932 533 ntBASIC5.44□□□□□ -1.54
SOX2P48431 RSU1P1-201ENST00000453416 441 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AKR1D1P1-201ENST00000457236 936 ntBASIC5.44□□□□□ -1.54
SOX2P48431 snoU13.29-201ENST00000459370 104 ntBASIC5.44□□□□□ -1.54
SOX2P48431 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX2P48431 SYT14P1-201ENST00000481459 721 ntBASIC5.44□□□□□ -1.54
SOX2P48431 RPS26P24-201ENST00000497656 331 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX2P48431 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 AC105391.1-201ENST00000503155 1045 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX2P48431 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX2P48431 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX2P48431 EEF1A1P37-201ENST00000522748 715 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.44□□□□□ -1.54
SOX2P48431 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX2P48431 AC092865.1-201ENST00000544395 1023 ntBASIC5.44□□□□□ -1.54
SOX2P48431 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX2P48431 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX2P48431 AC023968.1-201ENST00000560719 475 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AC021483.2-201ENST00000567415 758 ntBASIC5.44□□□□□ -1.54
SOX2P48431 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.44□□□□□ -1.54
SOX2P48431 FCGR1CP-201ENST00000579737 1127 ntBASIC5.44□□□□□ -1.54
SOX2P48431 MIR4433B-201ENST00000581329 102 ntBASIC5.44□□□□□ -1.54
SOX2P48431 CBX3P2-202ENST00000583365 535 ntBASIC5.44□□□□□ -1.54
SOX2P48431 RN7SL475P-201ENST00000583379 298 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AC020916.2-201ENST00000591242 360 ntBASIC5.44□□□□□ -1.54
SOX2P48431 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX2P48431 AL606834.3-201ENST00000602615 496 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AC012175.1-201ENST00000603755 531 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AC004890.3-201ENST00000605566 1095 ntBASIC5.44□□□□□ -1.54
SOX2P48431 AC073137.1-201ENST00000605636 634 ntBASIC5.44□□□□□ -1.54
SOX2P48431 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX2P48431 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.44□□□□□ -1.54
SOX2P48431 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX2P48431 CYCSP41-201ENST00000616920 296 ntBASIC5.44□□□□□ -1.54
SOX2P48431 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SOX2P48431 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SOX2P48431 AC006927.2-201ENST00000639256 389 ntBASIC5.44□□□□□ -1.54
SOX2P48431 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SOX2P48431 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX2P48431 AC012078.1-201ENST00000405035 1646 ntBASIC5.44□□□□□ -1.54
SOX2P48431 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SOX2P48431 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms