Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD4P46934 GAPDHP24-201ENST00000328713 983 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 AC096921.1-201ENST00000411661 375 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 NPM1P36-201ENST00000415681 835 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 BMS1P17-202ENST00000416720 316 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.68□□□□□ -1.34
NEDD4P46934 RPL34P3-201ENST00000421454 338 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 AC113412.1-201ENST00000425840 504 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.68□□□□□ -1.34
NEDD4P46934 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.68□□□□□ -1.34
NEDD4P46934 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.68□□□□□ -1.34
NEDD4P46934 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.68□□□□□ -1.34
NEDD4P46934 AC002504.1-201ENST00000438281 691 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.68□□□□□ -1.34
NEDD4P46934 LRRC37A14P-201ENST00000452297 462 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 AP000547.1-201ENST00000454360 617 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 PDCL3P4-201ENST00000489621 720 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 RPL7P51-201ENST00000490532 749 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.68□□□□□ -1.34
NEDD4P46934 AC136777.2-201ENST00000522979 358 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD4P46934 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.68□□□□□ -1.34
NEDD4P46934 AGGF1P7-201ENST00000562369 913 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD4P46934 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD4P46934 AC060780.2-201ENST00000589047 198 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.68□□□□□ -1.34
NEDD4P46934 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
NEDD4P46934 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
NEDD4P46934 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD4P46934 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD4P46934 AC006206.1-201ENST00000544842 3387 ntBASIC6.67□□□□□ -1.34
NEDD4P46934 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
NEDD4P46934 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.67□□□□□ -1.34
NEDD4P46934 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD4P46934 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD4P46934 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD4P46934 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD4P46934 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD4P46934 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD4P46934 AC005042.1-201ENST00000393397 800 ntBASIC6.67□□□□□ -1.34
NEDD4P46934 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD4P46934 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.67□□□□□ -1.34
NEDD4P46934 Z84478.1-201ENST00000438230 1219 ntBASIC6.67□□□□□ -1.34
NEDD4P46934 AL391987.1-201ENST00000441025 200 ntBASIC6.67□□□□□ -1.34
NEDD4P46934 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD4P46934 RPS23P9-201ENST00000448848 438 ntBASIC6.67□□□□□ -1.34
NEDD4P46934 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD4P46934 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.67□□□□□ -1.34
NEDD4P46934 AC087672.1-201ENST00000479876 766 ntBASIC6.67□□□□□ -1.34
NEDD4P46934 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.67□□□□□ -1.34
NEDD4P46934 AC104109.1-201ENST00000498563 436 ntBASIC6.67□□□□□ -1.34
NEDD4P46934 AC090058.1-201ENST00000498788 435 ntBASIC6.67□□□□□ -1.34
NEDD4P46934 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.67□□□□□ -1.34
NEDD4P46934 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
NEDD4P46934 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.67□□□□□ -1.34
NEDD4P46934 CU639417.4-201ENST00000623928 207 ntBASIC6.67□□□□□ -1.34
NEDD4P46934 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD4P46934 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD4P46934 AC068870.1-201ENST00000563737 2455 ntBASIC6.67□□□□□ -1.34
NEDD4P46934 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD4P46934 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD4P46934 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.67□□□□□ -1.34
NEDD4P46934 AC123769.1-201ENST00000530992 3192 ntBASIC6.67□□□□□ -1.34
NEDD4P46934 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
NEDD4P46934 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD4P46934 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD4P46934 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.66□□□□□ -1.34
NEDD4P46934 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD4P46934 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
NEDD4P46934 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
NEDD4P46934 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD4P46934 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.66□□□□□ -1.34
NEDD4P46934 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NEDD4P46934 RNA5SP242-201ENST00000364171 118 ntBASIC6.66□□□□□ -1.34
NEDD4P46934 RNU1-136P-201ENST00000384181 164 ntBASIC6.66□□□□□ -1.34
NEDD4P46934 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD4P46934 OR6E1P-201ENST00000414424 923 ntBASIC6.66□□□□□ -1.34
NEDD4P46934 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD4P46934 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.66□□□□□ -1.34
NEDD4P46934 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.66□□□□□ -1.34
NEDD4P46934 VDAC2P4-201ENST00000452925 711 ntBASIC6.66□□□□□ -1.34
NEDD4P46934 MEMO1P4-201ENST00000453590 386 ntBASIC6.66□□□□□ -1.34
NEDD4P46934 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD4P46934 AC090142.2-201ENST00000483263 416 ntBASIC6.66□□□□□ -1.34
NEDD4P46934 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
NEDD4P46934 AC109481.1-201ENST00000509173 282 ntBASIC6.66□□□□□ -1.34
NEDD4P46934 AC074087.1-201ENST00000512059 724 ntBASIC6.66□□□□□ -1.34
NEDD4P46934 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD4P46934 AC137627.1-201ENST00000545761 289 ntBASIC6.66□□□□□ -1.34
NEDD4P46934 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.66□□□□□ -1.34
NEDD4P46934 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NEDD4P46934 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.66□□□□□ -1.34
NEDD4P46934 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD4P46934 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD4P46934 AC008691.1-209ENST00000642094 814 ntBASIC6.66□□□□□ -1.34
NEDD4P46934 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD4P46934 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD4P46934 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD4P46934 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms