Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX3P41225 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX3P41225 AL122020.1-201ENST00000472287 459 ntBASIC5.49□□□□□ -1.53
SOX3P41225 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
SOX3P41225 AL133372.1-201ENST00000493565 745 ntBASIC5.49□□□□□ -1.53
SOX3P41225 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX3P41225 UGT2A3P7-201ENST00000510485 734 ntBASIC5.49□□□□□ -1.53
SOX3P41225 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX3P41225 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.49□□□□□ -1.53
SOX3P41225 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX3P41225 PCNAP4-201ENST00000532690 730 ntBASIC5.49□□□□□ -1.53
SOX3P41225 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SOX3P41225 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX3P41225 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX3P41225 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX3P41225 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX3P41225 AC234775.3-201ENST00000564612 656 ntBASIC5.49□□□□□ -1.53
SOX3P41225 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SOX3P41225 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX3P41225 AC243960.7-201ENST00000623532 707 ntBASIC5.49□□□□□ -1.53
SOX3P41225 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX3P41225 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX3P41225 AC063952.1-203ENST00000634410 658 ntBASIC5.49□□□□□ -1.53
SOX3P41225 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.49□□□□□ -1.53
SOX3P41225 AC132825.8-201ENST00000640783 297 ntBASIC5.49□□□□□ -1.53
SOX3P41225 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX3P41225 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX3P41225 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SOX3P41225 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX3P41225 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX3P41225 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX3P41225 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SOX3P41225 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX3P41225 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SOX3P41225 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX3P41225 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX3P41225 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX3P41225 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX3P41225 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SOX3P41225 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
SOX3P41225 RN7SKP128-201ENST00000364270 303 ntBASIC5.48□□□□□ -1.53
SOX3P41225 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.48□□□□□ -1.53
SOX3P41225 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SOX3P41225 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SOX3P41225 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX3P41225 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX3P41225 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX3P41225 RPL5P2-201ENST00000429598 854 ntBASIC5.48□□□□□ -1.53
SOX3P41225 AL445928.1-201ENST00000435545 222 ntBASIC5.48□□□□□ -1.53
SOX3P41225 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX3P41225 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX3P41225 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX3P41225 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX3P41225 AL162739.1-201ENST00000450606 307 ntBASIC5.48□□□□□ -1.53
SOX3P41225 FCF1P7-201ENST00000451185 558 ntBASIC5.48□□□□□ -1.53
SOX3P41225 SDC4P-201ENST00000453285 601 ntBASIC5.48□□□□□ -1.53
SOX3P41225 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX3P41225 ACA64.4-201ENST00000459070 127 ntBASIC5.48□□□□□ -1.53
SOX3P41225 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 AC097486.1-201ENST00000515331 210 ntBASIC5.48□□□□□ -1.53
SOX3P41225 SNORA48.9-201ENST00000516419 162 ntBASIC5.48□□□□□ -1.53
SOX3P41225 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX3P41225 EIF1AXP2-201ENST00000555940 413 ntBASIC5.48□□□□□ -1.53
SOX3P41225 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.48□□□□□ -1.53
SOX3P41225 AC027243.2-201ENST00000602530 724 ntBASIC5.48□□□□□ -1.53
SOX3P41225 AL157762.1-201ENST00000619612 415 ntBASIC5.48□□□□□ -1.53
SOX3P41225 PARP4P2-201ENST00000446672 3326 ntBASIC5.48□□□□□ -1.53
SOX3P41225 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX3P41225 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX3P41225 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SOX3P41225 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX3P41225 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 AC020656.2-201ENST00000613291 5309 ntBASIC5.47□□□□□ -1.53
SOX3P41225 OR4G1P-202ENST00000641173 1788 ntBASIC5.47□□□□□ -1.53
SOX3P41225 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX3P41225 AL355488.2-201ENST00000609909 2850 ntBASIC5.47□□□□□ -1.53
SOX3P41225 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 AC005224.3-201ENST00000584683 2140 ntBASIC5.47□□□□□ -1.53
SOX3P41225 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX3P41225 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SOX3P41225 OR52B3P-201ENST00000314715 928 ntBASIC5.47□□□□□ -1.53
SOX3P41225 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SOX3P41225 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms