Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.93□□□□□ -1.3
COL5A3P25940 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
COL5A3P25940 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
COL5A3P25940 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.93□□□□□ -1.3
COL5A3P25940 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.93□□□□□ -1.3
COL5A3P25940 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 CASC19-281ENST00000642118 1554 ntBASIC6.93□□□□□ -1.3
COL5A3P25940 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 WBP11P1-201ENST00000562560 1931 ntBASIC6.93□□□□□ -1.3
COL5A3P25940 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.93□□□□□ -1.3
COL5A3P25940 SNORD56.6-201ENST00000384569 71 ntBASIC6.93□□□□□ -1.3
COL5A3P25940 CYB5AP4-201ENST00000396692 399 ntBASIC6.93□□□□□ -1.3
COL5A3P25940 AL035419.1-201ENST00000397037 564 ntBASIC6.93□□□□□ -1.3
COL5A3P25940 AC013442.1-201ENST00000397347 228 ntBASIC6.93□□□□□ -1.3
COL5A3P25940 DDX39BP1-205ENST00000422507 192 ntBASIC6.93□□□□□ -1.3
COL5A3P25940 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.93□□□□□ -1.3
COL5A3P25940 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.93□□□□□ -1.3
COL5A3P25940 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.93□□□□□ -1.3
COL5A3P25940 RNA5SP373-201ENST00000517271 95 ntBASIC6.93□□□□□ -1.3
COL5A3P25940 OR5AM1P-201ENST00000532136 1032 ntBASIC6.93□□□□□ -1.3
COL5A3P25940 AC137627.1-201ENST00000545761 289 ntBASIC6.93□□□□□ -1.3
COL5A3P25940 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.93□□□□□ -1.3
COL5A3P25940 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.93□□□□□ -1.3
COL5A3P25940 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COL5A3P25940 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A3P25940 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A3P25940 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL5A3P25940 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.92□□□□□ -1.3
COL5A3P25940 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
COL5A3P25940 AL034546.1-201ENST00000623740 3693 ntBASIC6.92□□□□□ -1.3
COL5A3P25940 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL5A3P25940 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
COL5A3P25940 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A3P25940 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.92□□□□□ -1.3
COL5A3P25940 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A3P25940 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A3P25940 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A3P25940 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A3P25940 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.92□□□□□ -1.3
COL5A3P25940 AL451063.1-201ENST00000450164 1133 ntBASIC6.92□□□□□ -1.3
COL5A3P25940 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.92□□□□□ -1.3
COL5A3P25940 AC021106.1-201ENST00000509020 1058 ntBASIC6.92□□□□□ -1.3
COL5A3P25940 AC078899.1-201ENST00000521432 1185 ntBASIC6.92□□□□□ -1.3
COL5A3P25940 AP002373.2-201ENST00000541631 1060 ntBASIC6.92□□□□□ -1.3
COL5A3P25940 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.92□□□□□ -1.3
COL5A3P25940 AC063949.1-201ENST00000552900 865 ntBASIC6.92□□□□□ -1.3
COL5A3P25940 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.92□□□□□ -1.3
COL5A3P25940 ELOCP28-201ENST00000590044 317 ntBASIC6.92□□□□□ -1.3
COL5A3P25940 MIR378J-201ENST00000611988 109 ntBASIC6.92□□□□□ -1.3
COL5A3P25940 AC119674.1-217ENST00000641942 1086 ntBASIC6.92□□□□□ -1.3
COL5A3P25940 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A3P25940 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A3P25940 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
COL5A3P25940 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A3P25940 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A3P25940 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A3P25940 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A3P25940 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A3P25940 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
COL5A3P25940 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
COL5A3P25940 SNORD1C-201ENST00000363315 78 ntBASIC6.91□□□□□ -1.3
COL5A3P25940 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A3P25940 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 ELOCP3-201ENST00000439303 348 ntBASIC6.91□□□□□ -1.3
COL5A3P25940 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A3P25940 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.91□□□□□ -1.3
COL5A3P25940 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.91□□□□□ -1.3
COL5A3P25940 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
COL5A3P25940 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A3P25940 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.91□□□□□ -1.3
COL5A3P25940 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.91□□□□□ -1.3
COL5A3P25940 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
COL5A3P25940 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A3P25940 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A3P25940 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.91□□□□□ -1.3
COL5A3P25940 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A3P25940 AC009962.1-201ENST00000567327 3813 ntBASIC6.91□□□□□ -1.3
COL5A3P25940 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms