Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.99□□□□□ -1.13
RFX1P22670 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 Y_RNA.311-201ENST00000365068 96 ntBASIC7.99□□□□□ -1.13
RFX1P22670 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.99□□□□□ -1.13
RFX1P22670 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 RNU6-98P-201ENST00000384173 107 ntBASIC7.99□□□□□ -1.13
RFX1P22670 RNU6-1119P-201ENST00000384349 108 ntBASIC7.99□□□□□ -1.13
RFX1P22670 RNU6-253P-201ENST00000384730 105 ntBASIC7.99□□□□□ -1.13
RFX1P22670 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 AL079341.1-201ENST00000404701 1207 ntBASIC7.99□□□□□ -1.13
RFX1P22670 RNU6ATAC25P-201ENST00000408798 117 ntBASIC7.99□□□□□ -1.13
RFX1P22670 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC7.99□□□□□ -1.13
RFX1P22670 RN7SKP142-201ENST00000411236 328 ntBASIC7.99□□□□□ -1.13
RFX1P22670 RPL7P8-201ENST00000411964 730 ntBASIC7.99□□□□□ -1.13
RFX1P22670 CEACAMP8-201ENST00000413902 580 ntBASIC7.99□□□□□ -1.13
RFX1P22670 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC7.99□□□□□ -1.13
RFX1P22670 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 GAPDHP69-201ENST00000425504 1008 ntBASIC7.99□□□□□ -1.13
RFX1P22670 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.99□□□□□ -1.13
RFX1P22670 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 AL391380.1-201ENST00000439300 1432 ntBASIC7.99□□□□□ -1.13
RFX1P22670 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 OR52E7P-201ENST00000452394 933 ntBASIC7.99□□□□□ -1.13
RFX1P22670 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 AC026336.1-201ENST00000466577 351 ntBASIC7.99□□□□□ -1.13
RFX1P22670 HMGB3P13-201ENST00000511263 607 ntBASIC7.99□□□□□ -1.13
RFX1P22670 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.99□□□□□ -1.13
RFX1P22670 SMARCE1P4-201ENST00000523647 241 ntBASIC7.99□□□□□ -1.13
RFX1P22670 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 OR5M4P-201ENST00000529436 925 ntBASIC7.99□□□□□ -1.13
RFX1P22670 OR9L1P-201ENST00000529493 933 ntBASIC7.99□□□□□ -1.13
RFX1P22670 OR4C1P-201ENST00000530880 937 ntBASIC7.99□□□□□ -1.13
RFX1P22670 OR5F2P-201ENST00000532761 941 ntBASIC7.99□□□□□ -1.13
RFX1P22670 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.99□□□□□ -1.13
RFX1P22670 OR4A6P-201ENST00000534364 970 ntBASIC7.99□□□□□ -1.13
RFX1P22670 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 AC008083.2-201ENST00000546707 476 ntBASIC7.99□□□□□ -1.13
RFX1P22670 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7.99□□□□□ -1.13
RFX1P22670 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
RFX1P22670 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.99□□□□□ -1.13
RFX1P22670 AC087683.1-201ENST00000591187 441 ntBASIC7.99□□□□□ -1.13
RFX1P22670 AP002884.5-201ENST00000595053 1132 ntBASIC7.99□□□□□ -1.13
RFX1P22670 AC005614.1-201ENST00000598952 3653 ntBASIC7.99□□□□□ -1.13
RFX1P22670 AL390838.2-201ENST00000602394 274 ntBASIC7.99□□□□□ -1.13
RFX1P22670 U73023.1-201ENST00000603134 700 ntBASIC7.99□□□□□ -1.13
RFX1P22670 AC097381.3-201ENST00000608962 462 ntBASIC7.99□□□□□ -1.13
RFX1P22670 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.99□□□□□ -1.13
RFX1P22670 U6atac.1-201ENST00000616025 117 ntBASIC7.99□□□□□ -1.13
RFX1P22670 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 AC006840.1-201ENST00000623069 542 ntBASIC7.99□□□□□ -1.13
RFX1P22670 AC135068.5-201ENST00000624197 983 ntBASIC7.99□□□□□ -1.13
RFX1P22670 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.99□□□□□ -1.13
RFX1P22670 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.99□□□□□ -1.13
RFX1P22670 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.99□□□□□ -1.13
RFX1P22670 AC087565.3-203ENST00000641018 837 ntBASIC7.99□□□□□ -1.13
RFX1P22670 OR4C1P-202ENST00000641065 1569 ntBASIC7.99□□□□□ -1.13
RFX1P22670 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
RFX1P22670 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.99□□□□□ -1.13
RFX1P22670 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.98□□□□□ -1.13
RFX1P22670 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 AC009166.2-201ENST00000624410 2833 ntBASIC7.98□□□□□ -1.13
RFX1P22670 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.98□□□□□ -1.13
RFX1P22670 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.98□□□□□ -1.13
RFX1P22670 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.98□□□□□ -1.13
RFX1P22670 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
RFX1P22670 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 MIR16-1-201ENST00000385271 89 ntBASIC7.98□□□□□ -1.13
RFX1P22670 DEFB108C-201ENST00000400154 252 ntBASIC7.98□□□□□ -1.13
RFX1P22670 TYMSP1-201ENST00000407851 869 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AC007899.1-201ENST00000412776 775 ntBASIC7.98□□□□□ -1.13
RFX1P22670 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.98□□□□□ -1.13
RFX1P22670 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.98□□□□□ -1.13
RFX1P22670 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.98□□□□□ -1.13
RFX1P22670 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.98□□□□□ -1.13
RFX1P22670 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.98□□□□□ -1.13
RFX1P22670 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.98□□□□□ -1.13
RFX1P22670 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.98□□□□□ -1.13
RFX1P22670 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.98□□□□□ -1.13
RFX1P22670 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.98□□□□□ -1.13
RFX1P22670 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms