Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFRAP16234 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PDGFRAP16234 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFRAP16234 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFRAP16234 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFRAP16234 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFRAP16234 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
PDGFRAP16234 OR2W4P-201ENST00000406496 926 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFRAP16234 NDUFS5P5-201ENST00000437256 321 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 AC096775.1-201ENST00000437724 448 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFRAP16234 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.14□□□□□ -1.43
PDGFRAP16234 RNU1-88P-201ENST00000459274 128 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 TRBV8-1-201ENST00000481590 279 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 AC099521.1-201ENST00000482557 334 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.14□□□□□ -1.43
PDGFRAP16234 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.14□□□□□ -1.43
PDGFRAP16234 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.14□□□□□ -1.43
PDGFRAP16234 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFRAP16234 AC006530.1-201ENST00000555980 571 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 AC091078.2-201ENST00000557145 559 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PDGFRAP16234 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PDGFRAP16234 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFRAP16234 AP001267.4-201ENST00000602598 545 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 AC021422.1-201ENST00000621212 473 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 OR11H2-202ENST00000641517 1085 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PDGFRAP16234 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFRAP16234 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFRAP16234 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFRAP16234 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
PDGFRAP16234 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFRAP16234 AC091305.2-201ENST00000624049 1576 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 TTC41P-205ENST00000551270 3963 ntBASIC6.14□□□□□ -1.43
PDGFRAP16234 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFRAP16234 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFRAP16234 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
PDGFRAP16234 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFRAP16234 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 AP004607.3-201ENST00000530354 3915 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
PDGFRAP16234 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PDGFRAP16234 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFRAP16234 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFRAP16234 BX284632.2-201ENST00000421091 399 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFRAP16234 RPL34P27-201ENST00000428810 349 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 DEFA9P-201ENST00000433042 285 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFRAP16234 AL512605.1-202ENST00000441919 381 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFRAP16234 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFRAP16234 AL359955.2-201ENST00000445380 353 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 AL358876.1-201ENST00000453364 1075 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 OR7L1P-201ENST00000456181 380 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 AL157777.1-201ENST00000468100 304 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 AL122020.1-201ENST00000472287 459 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 AC006539.1-201ENST00000481419 501 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFRAP16234 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 AC026782.2-201ENST00000510845 636 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 GAPDHP71-201ENST00000511530 1003 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFRAP16234 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 SNORD116-30-201ENST00000516468 85 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 PCNAP4-201ENST00000532690 730 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFRAP16234 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.13□□□□□ -1.43
PDGFRAP16234 AP000619.2-201ENST00000546014 969 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.13□□□□□ -1.43
PDGFRAP16234 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFRAP16234 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFRAP16234 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFRAP16234 AC092121.1-201ENST00000569452 202 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFRAP16234 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFRAP16234 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFRAP16234 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFRAP16234 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFRAP16234 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFRAP16234 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PDGFRAP16234 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFRAP16234 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PDGFRAP16234 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFRAP16234 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFRAP16234 AL513548.1-201ENST00000562904 1724 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
PDGFRAP16234 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
PDGFRAP16234 AC020633.1-201ENST00000468439 2247 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms