Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC010678.1-201ENST00000614118 713 ntBASIC7.62□□□□□ -1.19
HOXD8P13378 AC004241.2-201ENST00000614562 444 ntBASIC7.62□□□□□ -1.19
HOXD8P13378 FRG1HP-204ENST00000617940 757 ntBASIC7.62□□□□□ -1.19
HOXD8P13378 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.62□□□□□ -1.19
HOXD8P13378 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
HOXD8P13378 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC7.62□□□□□ -1.19
HOXD8P13378 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.62□□□□□ -1.19
HOXD8P13378 SEPT14P19-203ENST00000633205 211 ntBASIC7.62□□□□□ -1.19
HOXD8P13378 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.62□□□□□ -1.19
HOXD8P13378 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HOXD8P13378 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HOXD8P13378 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HOXD8P13378 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HOXD8P13378 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.62□□□□□ -1.19
HOXD8P13378 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HOXD8P13378 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.62□□□□□ -1.19
HOXD8P13378 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.62□□□□□ -1.19
HOXD8P13378 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.62□□□□□ -1.19
HOXD8P13378 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
HOXD8P13378 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
HOXD8P13378 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
HOXD8P13378 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.61□□□□□ -1.19
HOXD8P13378 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXD8P13378 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
HOXD8P13378 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 RNA5SP321-201ENST00000362722 111 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 U3.4-201ENST00000363352 213 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 SNORA70.3-201ENST00000365075 132 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 RNU6-761P-201ENST00000384148 107 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 RNU6-1119P-201ENST00000384349 108 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 MIR621-201ENST00000384919 96 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 DEFB108C-201ENST00000400154 252 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 RN7SKP232-201ENST00000410170 290 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 RNU6-757P-201ENST00000410334 100 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 MRPS21P5-201ENST00000417885 231 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXD8P13378 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXD8P13378 AL139184.1-202ENST00000422303 222 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 IPPKP1-201ENST00000422501 768 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXD8P13378 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.61□□□□□ -1.19
HOXD8P13378 AC005189.1-201ENST00000431286 310 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXD8P13378 COL11A2P1-205ENST00000441798 676 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 AC245291.3-201ENST00000443400 292 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXD8P13378 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXD8P13378 RN7SL168P-201ENST00000463821 279 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 AC037198.2-201ENST00000478845 733 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 RPL29P23-201ENST00000486188 442 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 RPS10P20-201ENST00000494130 463 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 AC093281.2-201ENST00000510153 597 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 AC026782.2-201ENST00000510845 636 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXD8P13378 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXD8P13378 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.61□□□□□ -1.19
HOXD8P13378 KCTD9P6-201ENST00000522306 950 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 AP002963.1-201ENST00000530590 184 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 UBE2NP1-201ENST00000545592 458 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXD8P13378 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXD8P13378 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.61□□□□□ -1.19
HOXD8P13378 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC7.61□□□□□ -1.19
HOXD8P13378 AC005726.4-201ENST00000582858 458 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 ABBA01006766.1-201ENST00000584728 294 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 AC096553.1-201ENST00000605169 829 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 AC006270.3-201ENST00000605967 1036 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXD8P13378 AL133370.2-201ENST00000619934 439 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
HOXD8P13378 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.61□□□□□ -1.19
HOXD8P13378 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.61□□□□□ -1.19
HOXD8P13378 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 AL354702.2-202ENST00000641481 890 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 CASC19-264ENST00000641912 1184 ntBASIC7.61□□□□□ -1.19
HOXD8P13378 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
HOXD8P13378 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXD8P13378 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.61□□□□□ -1.19
HOXD8P13378 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.61□□□□□ -1.19
HOXD8P13378 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
HOXD8P13378 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.61□□□□□ -1.19
HOXD8P13378 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HOXD8P13378 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms