Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC4P09017 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
HOXC4P09017 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC4P09017 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC4P09017 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HOXC4P09017 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXC4P09017 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC4P09017 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC4P09017 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC4P09017 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC4P09017 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC4P09017 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXC4P09017 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXC4P09017 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC4P09017 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC4P09017 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HOXC4P09017 NENFP1-201ENST00000419476 466 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 AC079355.1-201ENST00000421770 223 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 SETP9-201ENST00000423837 832 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC4P09017 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC4P09017 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC4P09017 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC4P09017 AC004129.2-201ENST00000457229 287 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 AC018638.3-201ENST00000461273 132 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC4P09017 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC4P09017 AC078899.1-201ENST00000521432 1185 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC4P09017 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC4P09017 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC4P09017 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC4P09017 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC4P09017 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC4P09017 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC4P09017 AC004477.3-201ENST00000614061 590 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 AC008115.3-201ENST00000614874 549 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 AL049767.1-202ENST00000637826 242 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC4P09017 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC4P09017 LINC02019-201ENST00000608605 2060 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC4P09017 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
HOXC4P09017 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC4P09017 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC4P09017 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC4P09017 YES1P1-201ENST00000418510 1628 ntBASIC5.66□□□□□ -1.5
HOXC4P09017 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC4P09017 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC4P09017 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC4P09017 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC4P09017 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
HOXC4P09017 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC4P09017 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC4P09017 AC007842.1-201ENST00000597336 2039 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC4P09017 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC4P09017 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HOXC4P09017 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC4P09017 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC4P09017 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC4P09017 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HOXC4P09017 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HOXC4P09017 SNORA51.1-201ENST00000363243 140 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 RNA5SP132-201ENST00000364725 118 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 U3.25-201ENST00000391209 220 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 AL513325.1-201ENST00000417716 1034 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC4P09017 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC4P09017 AC242426.1-201ENST00000435270 960 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC4P09017 LDHBP2-201ENST00000456969 1005 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC4P09017 RPS23P2-201ENST00000463671 415 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC4P09017 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC4P09017 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC4P09017 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC4P09017 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC4P09017 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC4P09017 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC4P09017 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC4P09017 MIR1273E-201ENST00000581165 102 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC4P09017 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.65□□□□□ -1.5
HOXC4P09017 AP000894.4-201ENST00000610185 483 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 AL589935.2-201ENST00000616471 1231 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 AC016542.2-201ENST00000624201 619 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 AL390318.1-201ENST00000624564 687 ntBASIC5.65□□□□□ -1.5
HOXC4P09017 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC4P09017 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HOXC4P09017 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
HOXC4P09017 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HOXC4P09017 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.65□□□□□ -1.51
HOXC4P09017 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms