Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.44□□□□□ -1.38
MMP3P08254 AC211433.2-201ENST00000608433 387 ntBASIC6.44□□□□□ -1.38
MMP3P08254 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.44□□□□□ -1.38
MMP3P08254 AL355974.3-201ENST00000617383 467 ntBASIC6.44□□□□□ -1.38
MMP3P08254 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.44□□□□□ -1.38
MMP3P08254 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
MMP3P08254 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
MMP3P08254 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.44□□□□□ -1.38
MMP3P08254 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MMP3P08254 AL049634.1-201ENST00000453770 1720 ntBASIC6.44□□□□□ -1.38
MMP3P08254 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.44□□□□□ -1.38
MMP3P08254 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
MMP3P08254 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MMP3P08254 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MMP3P08254 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MMP3P08254 CASC19-248ENST00000641674 1356 ntBASIC6.44□□□□□ -1.38
MMP3P08254 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.43□□□□□ -1.38
MMP3P08254 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MMP3P08254 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
MMP3P08254 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.43□□□□□ -1.38
MMP3P08254 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MMP3P08254 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MMP3P08254 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.43□□□□□ -1.38
MMP3P08254 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.43□□□□□ -1.38
MMP3P08254 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
MMP3P08254 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MMP3P08254 AC083799.1-201ENST00000366451 910 ntBASIC6.43□□□□□ -1.38
MMP3P08254 AP003170.5-201ENST00000397185 335 ntBASIC6.43□□□□□ -1.38
MMP3P08254 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.43□□□□□ -1.38
MMP3P08254 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.43□□□□□ -1.38
MMP3P08254 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.43□□□□□ -1.38
MMP3P08254 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.43□□□□□ -1.38
MMP3P08254 RN7SL570P-201ENST00000484405 292 ntBASIC6.43□□□□□ -1.38
MMP3P08254 COX6B1P2-201ENST00000489624 230 ntBASIC6.43□□□□□ -1.38
MMP3P08254 AC073610.1-201ENST00000489971 396 ntBASIC6.43□□□□□ -1.38
MMP3P08254 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.43□□□□□ -1.38
MMP3P08254 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.43□□□□□ -1.38
MMP3P08254 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.43□□□□□ -1.38
MMP3P08254 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.43□□□□□ -1.38
MMP3P08254 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.43□□□□□ -1.38
MMP3P08254 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.43□□□□□ -1.38
MMP3P08254 AL023583.1-201ENST00000607518 1143 ntBASIC6.43□□□□□ -1.38
MMP3P08254 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MMP3P08254 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.43□□□□□ -1.38
MMP3P08254 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.43□□□□□ -1.38
MMP3P08254 RAD17P2-201ENST00000451754 1977 ntBASIC6.43□□□□□ -1.38
MMP3P08254 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.43□□□□□ -1.38
MMP3P08254 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MMP3P08254 AC053481.2-202ENST00000582394 1500 ntBASIC6.43□□□□□ -1.38
MMP3P08254 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MMP3P08254 FBXL21-201ENST00000297158 1305 ntBASIC6.43□□□□□ -1.38
MMP3P08254 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
MMP3P08254 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.43□□□□□ -1.38
MMP3P08254 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.43□□□□□ -1.38
MMP3P08254 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.43□□□□□ -1.38
MMP3P08254 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
MMP3P08254 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MMP3P08254 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
MMP3P08254 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
MMP3P08254 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.42□□□□□ -1.38
MMP3P08254 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.42□□□□□ -1.38
MMP3P08254 RNA5SP234-201ENST00000363916 119 ntBASIC6.42□□□□□ -1.38
MMP3P08254 MIR105-2-201ENST00000385083 81 ntBASIC6.42□□□□□ -1.38
MMP3P08254 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 RPS17P17-201ENST00000419392 409 ntBASIC6.42□□□□□ -1.38
MMP3P08254 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.42□□□□□ -1.38
MMP3P08254 AL133173.1-201ENST00000423458 397 ntBASIC6.42□□□□□ -1.38
MMP3P08254 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.42□□□□□ -1.38
MMP3P08254 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.42□□□□□ -1.38
MMP3P08254 TRIM60P13-201ENST00000432350 1283 ntBASIC6.42□□□□□ -1.38
MMP3P08254 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.42□□□□□ -1.38
MMP3P08254 RANP1-206ENST00000455094 651 ntBASIC6.42□□□□□ -1.38
MMP3P08254 LDHBP2-201ENST00000456969 1005 ntBASIC6.42□□□□□ -1.38
MMP3P08254 AC004129.2-201ENST00000457229 287 ntBASIC6.42□□□□□ -1.38
MMP3P08254 AC100832.1-201ENST00000471945 383 ntBASIC6.42□□□□□ -1.38
MMP3P08254 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.42□□□□□ -1.38
MMP3P08254 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.42□□□□□ -1.38
MMP3P08254 AL035690.1-201ENST00000490892 383 ntBASIC6.42□□□□□ -1.38
MMP3P08254 OR51A1P-201ENST00000511110 946 ntBASIC6.42□□□□□ -1.38
MMP3P08254 RNU6-964P-201ENST00000516524 69 ntBASIC6.42□□□□□ -1.38
MMP3P08254 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.42□□□□□ -1.38
MMP3P08254 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.42□□□□□ -1.38
MMP3P08254 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.42□□□□□ -1.38
MMP3P08254 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.42□□□□□ -1.38
MMP3P08254 AC244502.2-201ENST00000543361 851 ntBASIC6.42□□□□□ -1.38
MMP3P08254 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.42□□□□□ -1.38
MMP3P08254 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
MMP3P08254 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MMP3P08254 RBM22P12-201ENST00000567098 1255 ntBASIC6.42□□□□□ -1.38
MMP3P08254 MIR4301-201ENST00000577203 66 ntBASIC6.42□□□□□ -1.38
MMP3P08254 MIR1269B-201ENST00000580405 75 ntBASIC6.42□□□□□ -1.38
MMP3P08254 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.42□□□□□ -1.38
MMP3P08254 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.42□□□□□ -1.38
MMP3P08254 AC007620.3-201ENST00000608131 497 ntBASIC6.42□□□□□ -1.38
MMP3P08254 AL359513.1-201ENST00000614364 557 ntBASIC6.42□□□□□ -1.38
MMP3P08254 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.42□□□□□ -1.38
MMP3P08254 AC004808.2-201ENST00000627965 773 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms