Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD74P04233 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.84□□□□□ -1.63
CD74P04233 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CD74P04233 AL022311.1-201ENST00000623726 19416 ntBASIC4.84□□□□□ -1.63
CD74P04233 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD74P04233 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.84□□□□□ -1.63
CD74P04233 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CD74P04233 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.84□□□□□ -1.63
CD74P04233 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.84□□□□□ -1.63
CD74P04233 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
CD74P04233 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.84□□□□□ -1.63
CD74P04233 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.84□□□□□ -1.63
CD74P04233 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CD74P04233 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD74P04233 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CD74P04233 AL139805.1-201ENST00000407837 289 ntBASIC4.84□□□□□ -1.63
CD74P04233 NPM1P23-201ENST00000440193 849 ntBASIC4.84□□□□□ -1.63
CD74P04233 AL645936.1-201ENST00000441979 518 ntBASIC4.84□□□□□ -1.63
CD74P04233 AC002553.3-201ENST00000453002 341 ntBASIC4.84□□□□□ -1.63
CD74P04233 YRDCP3-201ENST00000456507 480 ntBASIC4.84□□□□□ -1.63
CD74P04233 ABCC13-202ENST00000463099 3842 ntBASIC4.84□□□□□ -1.63
CD74P04233 MAST4-IT1-201ENST00000514241 658 ntBASIC4.84□□□□□ -1.63
CD74P04233 FTH1P11-201ENST00000517577 551 ntBASIC4.84□□□□□ -1.63
CD74P04233 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.84□□□□□ -1.63
CD74P04233 AC036111.2-201ENST00000533247 901 ntBASIC4.84□□□□□ -1.63
CD74P04233 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.84□□□□□ -1.63
CD74P04233 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CD74P04233 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.84□□□□□ -1.63
CD74P04233 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD74P04233 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.84□□□□□ -1.63
CD74P04233 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.84□□□□□ -1.63
CD74P04233 AC025283.1-201ENST00000572039 734 ntBASIC4.84□□□□□ -1.63
CD74P04233 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.84□□□□□ -1.63
CD74P04233 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.84□□□□□ -1.63
CD74P04233 DHFRP1-201ENST00000579682 559 ntBASIC4.84□□□□□ -1.63
CD74P04233 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.84□□□□□ -1.63
CD74P04233 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.84□□□□□ -1.63
CD74P04233 AC068213.1-201ENST00000625124 226 ntBASIC4.84□□□□□ -1.63
CD74P04233 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.84□□□□□ -1.63
CD74P04233 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.84□□□□□ -1.63
CD74P04233 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD74P04233 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CD74P04233 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CD74P04233 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.64
CD74P04233 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CD74P04233 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CD74P04233 AC011755.1-201ENST00000623763 2049 ntBASIC4.84□□□□□ -1.64
CD74P04233 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CD74P04233 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD74P04233 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CD74P04233 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD74P04233 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.83□□□□□ -1.64
CD74P04233 AC079097.1-201ENST00000512187 1399 ntBASIC4.83□□□□□ -1.64
CD74P04233 RPL11P4-201ENST00000332269 436 ntBASIC4.83□□□□□ -1.64
CD74P04233 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CD74P04233 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD74P04233 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD74P04233 AC005042.1-201ENST00000393397 800 ntBASIC4.83□□□□□ -1.64
CD74P04233 AL033519.1-201ENST00000407266 307 ntBASIC4.83□□□□□ -1.64
CD74P04233 SNRPEP6-201ENST00000407465 277 ntBASIC4.83□□□□□ -1.64
CD74P04233 AC099535.1-201ENST00000408928 371 ntBASIC4.83□□□□□ -1.64
CD74P04233 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.83□□□□□ -1.64
CD74P04233 UBTFL2-201ENST00000411859 1191 ntBASIC4.83□□□□□ -1.64
CD74P04233 AC006509.1-201ENST00000420788 634 ntBASIC4.83□□□□□ -1.64
CD74P04233 PRUNEP1-201ENST00000425846 705 ntBASIC4.83□□□□□ -1.64
CD74P04233 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.83□□□□□ -1.64
CD74P04233 AC023141.8-201ENST00000442554 208 ntBASIC4.83□□□□□ -1.64
CD74P04233 OR7E116P-201ENST00000448529 957 ntBASIC4.83□□□□□ -1.64
CD74P04233 AL445991.1-201ENST00000450381 475 ntBASIC4.83□□□□□ -1.64
CD74P04233 KF459542.1-201ENST00000450908 553 ntBASIC4.83□□□□□ -1.64
CD74P04233 TAAR4P-201ENST00000454843 1039 ntBASIC4.83□□□□□ -1.64
CD74P04233 RN7SL393P-201ENST00000463588 296 ntBASIC4.83□□□□□ -1.64
CD74P04233 PSAT1P4-201ENST00000466500 526 ntBASIC4.83□□□□□ -1.64
CD74P04233 AC091544.1-201ENST00000484702 348 ntBASIC4.83□□□□□ -1.64
CD74P04233 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.83□□□□□ -1.64
CD74P04233 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.83□□□□□ -1.64
CD74P04233 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.83□□□□□ -1.64
CD74P04233 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD74P04233 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.83□□□□□ -1.64
CD74P04233 CR383658.1-201ENST00000514609 734 ntBASIC4.83□□□□□ -1.64
CD74P04233 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.83□□□□□ -1.64
CD74P04233 AC079064.1-201ENST00000528365 362 ntBASIC4.83□□□□□ -1.64
CD74P04233 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.83□□□□□ -1.64
CD74P04233 AC122688.1-201ENST00000541494 223 ntBASIC4.83□□□□□ -1.64
CD74P04233 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD74P04233 AC008126.1-201ENST00000549019 480 ntBASIC4.83□□□□□ -1.64
CD74P04233 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.83□□□□□ -1.64
CD74P04233 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD74P04233 RN7SL66P-201ENST00000582099 264 ntBASIC4.83□□□□□ -1.64
CD74P04233 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD74P04233 AC036176.3-201ENST00000602456 418 ntBASIC4.83□□□□□ -1.64
CD74P04233 AL356608.1-201ENST00000610034 820 ntBASIC4.83□□□□□ -1.64
CD74P04233 MIR6885-201ENST00000612241 66 ntBASIC4.83□□□□□ -1.64
CD74P04233 MIR6889-201ENST00000613185 59 ntBASIC4.83□□□□□ -1.64
CD74P04233 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.83□□□□□ -1.64
CD74P04233 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD74P04233 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD74P04233 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CD74P04233 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CD74P04233 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms