Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.29
MBD4O95243 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
MBD4O95243 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
MBD4O95243 RNA5SP394-201ENST00000364216 119 ntBASIC6.96□□□□□ -1.3
MBD4O95243 RN7SKP69-201ENST00000365390 305 ntBASIC6.96□□□□□ -1.3
MBD4O95243 AC007068.1-201ENST00000396690 844 ntBASIC6.96□□□□□ -1.3
MBD4O95243 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.96□□□□□ -1.3
MBD4O95243 AC093155.2-201ENST00000420734 937 ntBASIC6.96□□□□□ -1.3
MBD4O95243 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.96□□□□□ -1.3
MBD4O95243 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.96□□□□□ -1.3
MBD4O95243 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.96□□□□□ -1.3
MBD4O95243 HMGB3P24-201ENST00000433260 622 ntBASIC6.96□□□□□ -1.3
MBD4O95243 AC064862.4-201ENST00000442180 334 ntBASIC6.96□□□□□ -1.3
MBD4O95243 OR6C72P-201ENST00000451403 892 ntBASIC6.96□□□□□ -1.3
MBD4O95243 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.96□□□□□ -1.3
MBD4O95243 RPS17P15-201ENST00000475609 349 ntBASIC6.96□□□□□ -1.3
MBD4O95243 PPP1R11P1-201ENST00000486095 376 ntBASIC6.96□□□□□ -1.3
MBD4O95243 TRBV5-2-201ENST00000489095 273 ntBASIC6.96□□□□□ -1.3
MBD4O95243 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.96□□□□□ -1.3
MBD4O95243 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.96□□□□□ -1.3
MBD4O95243 AP003080.1-202ENST00000526526 915 ntBASIC6.96□□□□□ -1.3
MBD4O95243 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.96□□□□□ -1.3
MBD4O95243 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.96□□□□□ -1.3
MBD4O95243 DPPA2P4-201ENST00000563717 878 ntBASIC6.96□□□□□ -1.3
MBD4O95243 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.96□□□□□ -1.3
MBD4O95243 AC009237.12-201ENST00000604755 742 ntBASIC6.96□□□□□ -1.3
MBD4O95243 RN7SL544P-201ENST00000617232 284 ntBASIC6.96□□□□□ -1.3
MBD4O95243 AC005899.7-201ENST00000618199 588 ntBASIC6.96□□□□□ -1.3
MBD4O95243 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.96□□□□□ -1.3
MBD4O95243 RN7SL763P-201ENST00000620922 284 ntBASIC6.96□□□□□ -1.3
MBD4O95243 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.96□□□□□ -1.3
MBD4O95243 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.96□□□□□ -1.3
MBD4O95243 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.96□□□□□ -1.3
MBD4O95243 AC087565.3-203ENST00000641018 837 ntBASIC6.96□□□□□ -1.3
MBD4O95243 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
MBD4O95243 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.96□□□□□ -1.3
MBD4O95243 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
MBD4O95243 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.96□□□□□ -1.3
MBD4O95243 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.96□□□□□ -1.3
MBD4O95243 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
MBD4O95243 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.96□□□□□ -1.3
MBD4O95243 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
MBD4O95243 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.96□□□□□ -1.3
MBD4O95243 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
MBD4O95243 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
MBD4O95243 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.96□□□□□ -1.3
MBD4O95243 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.95□□□□□ -1.3
MBD4O95243 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MBD4O95243 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MBD4O95243 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MBD4O95243 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
MBD4O95243 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
MBD4O95243 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.95□□□□□ -1.3
MBD4O95243 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
MBD4O95243 AP004607.3-201ENST00000530354 3915 ntBASIC6.95□□□□□ -1.3
MBD4O95243 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
MBD4O95243 IMMTP1-201ENST00000435590 2219 ntBASIC6.95□□□□□ -1.3
MBD4O95243 AC087752.1-201ENST00000391360 558 ntBASIC6.95□□□□□ -1.3
MBD4O95243 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.95□□□□□ -1.3
MBD4O95243 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.95□□□□□ -1.3
MBD4O95243 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.95□□□□□ -1.3
MBD4O95243 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.95□□□□□ -1.3
MBD4O95243 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.95□□□□□ -1.3
MBD4O95243 RPS3AP38-201ENST00000435889 763 ntBASIC6.95□□□□□ -1.3
MBD4O95243 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.95□□□□□ -1.3
MBD4O95243 AL391987.1-201ENST00000441025 200 ntBASIC6.95□□□□□ -1.3
MBD4O95243 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.95□□□□□ -1.3
MBD4O95243 NXT1P1-201ENST00000458481 316 ntBASIC6.95□□□□□ -1.3
MBD4O95243 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.95□□□□□ -1.3
MBD4O95243 RN7SL273P-201ENST00000481561 299 ntBASIC6.95□□□□□ -1.3
MBD4O95243 AC016687.1-201ENST00000482574 353 ntBASIC6.95□□□□□ -1.3
MBD4O95243 RPL32P33-201ENST00000487023 394 ntBASIC6.95□□□□□ -1.3
MBD4O95243 AC009120.1-201ENST00000493458 473 ntBASIC6.95□□□□□ -1.3
MBD4O95243 GOLGA5P1-201ENST00000507317 980 ntBASIC6.95□□□□□ -1.3
MBD4O95243 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.95□□□□□ -1.3
MBD4O95243 SCARNA6.1-201ENST00000516989 238 ntBASIC6.95□□□□□ -1.3
MBD4O95243 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.95□□□□□ -1.3
MBD4O95243 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.95□□□□□ -1.3
MBD4O95243 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.95□□□□□ -1.3
MBD4O95243 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.95□□□□□ -1.3
MBD4O95243 AC018659.2-201ENST00000624690 715 ntBASIC6.95□□□□□ -1.3
MBD4O95243 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
MBD4O95243 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.95□□□□□ -1.3
MBD4O95243 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MBD4O95243 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
MBD4O95243 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
MBD4O95243 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MBD4O95243 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 AC007842.1-201ENST00000597336 2039 ntBASIC6.94□□□□□ -1.3
MBD4O95243 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
MBD4O95243 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
MBD4O95243 AC010329.1-201ENST00000593903 8328 ntBASIC6.94□□□□□ -1.3
MBD4O95243 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
MBD4O95243 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
MBD4O95243 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.94□□□□□ -1.3
MBD4O95243 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms