Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXN3O00409 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.5□□□□□ -1.37
FOXN3O00409 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.5□□□□□ -1.37
FOXN3O00409 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 AL096803.3-201ENST00000609032 532 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 AL136097.3-201ENST00000611097 505 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 uc_338.29-201ENST00000615099 168 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 RFPL4AP6-201ENST00000616792 846 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 AC069234.4-201ENST00000621276 412 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 AC105105.5-201ENST00000622635 1294 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXN3O00409 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
FOXN3O00409 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXN3O00409 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
FOXN3O00409 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXN3O00409 AC092111.2-201ENST00000611627 1414 ntBASIC6.5□□□□□ -1.37
FOXN3O00409 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXN3O00409 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXN3O00409 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FOXN3O00409 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXN3O00409 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FOXN3O00409 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXN3O00409 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXN3O00409 RN7SKP184-201ENST00000362348 333 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
FOXN3O00409 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.49□□□□□ -1.37
FOXN3O00409 AC019205.1-201ENST00000421830 730 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.49□□□□□ -1.37
FOXN3O00409 AL354692.1-201ENST00000423044 315 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 AC092865.3-201ENST00000425390 1026 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.49□□□□□ -1.37
FOXN3O00409 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.49□□□□□ -1.37
FOXN3O00409 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.49□□□□□ -1.37
FOXN3O00409 GAPDHP59-201ENST00000435908 267 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 AC007383.1-201ENST00000445875 636 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXN3O00409 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 MTND2P6-201ENST00000455337 1030 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 EIF2S2P5-201ENST00000457635 968 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 AC098818.1-201ENST00000478593 252 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.49□□□□□ -1.37
FOXN3O00409 RPS27P20-201ENST00000492051 246 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 CR383658.1-201ENST00000514609 734 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXN3O00409 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.49□□□□□ -1.37
FOXN3O00409 AC244502.2-201ENST00000543361 851 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXN3O00409 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXN3O00409 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXN3O00409 MRPS21P8-201ENST00000569196 235 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 AC011500.1-201ENST00000601963 469 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 ABI1P1-201ENST00000603375 1120 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 BNIP3P31-201ENST00000604515 566 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 BNIP3P35-201ENST00000604530 490 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 AC025016.1-201ENST00000616746 682 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 AC019080.5-201ENST00000624891 757 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 AC073488.6-201ENST00000632293 754 ntBASIC6.49□□□□□ -1.37
FOXN3O00409 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXN3O00409 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
FOXN3O00409 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXN3O00409 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXN3O00409 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXN3O00409 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXN3O00409 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FOXN3O00409 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXN3O00409 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXN3O00409 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.48□□□□□ -1.37
FOXN3O00409 NAMPTP1-201ENST00000440465 2514 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 TTC41P-205ENST00000551270 3963 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXN3O00409 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXN3O00409 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.48□□□□□ -1.37
FOXN3O00409 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXN3O00409 SNORA63.3-201ENST00000362682 132 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 OR13C3-201ENST00000374781 1108 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
FOXN3O00409 YWHAZP6-201ENST00000399764 738 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 AL096800.1-201ENST00000405326 893 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 AL353692.2-201ENST00000407054 335 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 RN7SKP166-201ENST00000410812 305 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 RPL23AP18-201ENST00000416139 468 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 MTND2P15-201ENST00000418575 892 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms