Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SRRM4A7MD48 AC130365.2-201ENST00000525882 1201 ntBASIC4.81□□□□□ -1.64
SRRM4A7MD48 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 AP003168.1-201ENST00000530091 307 ntBASIC4.81□□□□□ -1.64
SRRM4A7MD48 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRRM4A7MD48 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRRM4A7MD48 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 NPM1P42-201ENST00000560329 862 ntBASIC4.81□□□□□ -1.64
SRRM4A7MD48 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SRRM4A7MD48 AL078601.3-201ENST00000573303 535 ntBASIC4.81□□□□□ -1.64
SRRM4A7MD48 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 AC073333.2-201ENST00000603589 769 ntBASIC4.81□□□□□ -1.64
SRRM4A7MD48 AP004372.1-201ENST00000604842 844 ntBASIC4.81□□□□□ -1.64
SRRM4A7MD48 AL356608.1-201ENST00000610034 820 ntBASIC4.81□□□□□ -1.64
SRRM4A7MD48 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.81□□□□□ -1.64
SRRM4A7MD48 uc_338.29-201ENST00000615099 168 ntBASIC4.81□□□□□ -1.64
SRRM4A7MD48 AL355974.3-201ENST00000617383 467 ntBASIC4.81□□□□□ -1.64
SRRM4A7MD48 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 AL442128.2-201ENST00000620246 1824 ntBASIC4.81□□□□□ -1.64
SRRM4A7MD48 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRRM4A7MD48 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SRRM4A7MD48 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.81□□□□□ -1.64
SRRM4A7MD48 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 SAMMSON-210ENST00000641260 1308 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 YWHAZP6-201ENST00000399764 738 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 MTND4LP14-201ENST00000429447 288 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 ARL4AP4-201ENST00000434170 518 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 AC073410.1-201ENST00000435125 589 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 AC009963.4-201ENST00000448535 339 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 AC073476.1-201ENST00000452854 407 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 PPIAP7-201ENST00000454070 489 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 AL603882.1-201ENST00000463059 681 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 PPP1R11P1-201ENST00000486095 376 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 AC083795.1-201ENST00000491760 320 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 AC108103.1-201ENST00000511286 446 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 AP000620.1-201ENST00000527147 504 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 AL731537.2-201ENST00000561565 951 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 ARGFXP2-201ENST00000579304 949 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 AC011500.1-201ENST00000601963 469 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 AP005131.7-201ENST00000610087 611 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 MIR6721-201ENST00000617181 87 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 AC074276.2-201ENST00000619891 348 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 AC007842.1-201ENST00000597336 2039 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SRRM4A7MD48 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 AC020633.1-201ENST00000468439 2247 ntBASIC4.8□□□□□ -1.64
SRRM4A7MD48 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRRM4A7MD48 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRRM4A7MD48 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC022417.1-201ENST00000624768 1303 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms