Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 SRRM1P3-201ENST00000426911 2678 ntBASIC5.59□□□□□ -1.52
TRBV5-4A0A0C4DH59 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRBV5-4A0A0C4DH59 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRBV5-4A0A0C4DH59 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRBV5-4A0A0C4DH59 AL591135.1-201ENST00000401578 5914 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 RNU6-167P-201ENST00000384292 106 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 SNORA11.5-201ENST00000408163 128 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 RPL34P3-201ENST00000421454 338 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AL662874.1-201ENST00000426065 230 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 BX119321.1-201ENST00000428912 797 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 TMEM183AP1-205ENST00000432739 290 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 LDHAP2-201ENST00000437325 985 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC073072.2-201ENST00000447425 348 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 SNORA43.3-201ENST00000517240 103 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 TRIM51DP-201ENST00000529746 596 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC084824.2-201ENST00000548906 345 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC010547.6-201ENST00000571789 193 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC115989.2-201ENST00000578640 563 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AL353729.2-201ENST00000605859 1249 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 AL357153.4-201ENST00000620487 1016 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 OR4F13P-202ENST00000560066 2054 ntBASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV5-4A0A0C4DH59 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC123769.1-201ENST00000530992 3192 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 RNA5SP46-201ENST00000362370 120 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 CDY17P-201ENST00000414121 1282 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AL596448.1-201ENST00000415024 392 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AKR1B10P1-201ENST00000425765 942 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC079807.1-201ENST00000429993 481 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 RPS29P14-201ENST00000431518 171 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 OR6C71P-201ENST00000432580 913 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 HMGB3P14-201ENST00000494195 599 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 IGKV2-19-201ENST00000518132 283 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 PMS2P3-207ENST00000529061 717 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC135626.1-201ENST00000556983 435 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AP005901.4-201ENST00000577336 569 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC015982.1-201ENST00000608113 465 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC025574.2-201ENST00000615621 514 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AL390318.1-201ENST00000624564 687 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC004076.2-201ENST00000620532 3323 ntBASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
TRBV5-4A0A0C4DH59 AC007998.4-201ENST00000612496 2533 ntBASIC5.56□□□□□ -1.52
TRBV5-4A0A0C4DH59 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.56□□□□□ -1.52
TRBV5-4A0A0C4DH59 BRAFP1-201ENST00000445336 2703 ntBASIC5.56□□□□□ -1.52
TRBV5-4A0A0C4DH59 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.56□□□□□ -1.52
TRBV5-4A0A0C4DH59 MAPK10-270ENST00000641102 3538 ntBASIC5.56□□□□□ -1.52
TRBV5-4A0A0C4DH59 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.56□□□□□ -1.52
TRBV5-4A0A0C4DH59 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRBV5-4A0A0C4DH59 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.56□□□□□ -1.52
TRBV5-4A0A0C4DH59 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms