Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 LINC02112-201ENST00000511616 1847 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AC006020.1-201ENST00000420179 1854 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AC013444.1-201ENST00000428909 1904 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 Y_RNA.255-201ENST00000364581 97 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 Y_RNA.364-201ENST00000365532 101 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 RNU6-769P-201ENST00000384407 104 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 PTPN2P1-201ENST00000423212 1072 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC116050.1-206ENST00000423774 213 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 RAC1P6-201ENST00000423911 575 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 FABP5P14-201ENST00000437273 393 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC002504.1-201ENST00000438281 691 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 MTCO1P27-201ENST00000448269 226 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 RNU7-63P-201ENST00000459054 62 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 MEMO1P3-201ENST00000459811 302 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC104164.4-201ENST00000483456 493 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC083904.1-201ENST00000487828 231 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC106872.2-201ENST00000494303 480 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC104109.1-201ENST00000498563 436 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 CFL1P5-201ENST00000508046 502 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 MRPS16P1-201ENST00000523462 412 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 MPPE1P1-201ENST00000557286 1076 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC110743.1-201ENST00000584870 478 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC026150.3-201ENST00000602595 499 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 SLC25A6P5-202ENST00000602729 1038 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 RPL26P30-202ENST00000602923 645 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC002059.1-201ENST00000608014 477 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AL049641.1-201ENST00000441055 1948 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AC127070.5-201ENST00000623177 2104 ntBASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCDHB13Q9Y5F0 ERG-206ENST00000398911 4914 ntTSL 5 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AL591848.3-201ENST00000570141 2968 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 AC005538.2-201ENST00000623215 1864 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 NLRP3P1-201ENST00000622303 1785 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 NUP58P1-201ENST00000502546 1738 ntBASIC9.43□□□□□ -0.9
PCDHB13Q9Y5F0 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms