Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 RNA5SP53-201ENST00000391299 120 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 PDCL3P5-201ENST00000398028 722 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC027644.1-201ENST00000419595 298 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 NPM1P30-201ENST00000425092 828 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC009237.4-201ENST00000441078 238 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 RPL12P49-201ENST00000441100 121 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AL137845.2-201ENST00000444292 988 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AL445991.1-201ENST00000450381 475 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 PMS2P11-201ENST00000451831 574 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC079193.1-201ENST00000460497 588 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC092691.2-201ENST00000461787 803 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AL121769.1-201ENST00000469473 401 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AP003385.3-201ENST00000472498 287 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 RPS6P4-201ENST00000494693 758 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 PFN2-217ENST00000498307 556 ntTSL 4 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 MINOS1P4-201ENST00000515470 318 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 ZNF705CP-201ENST00000530515 889 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AKIRIN1P1-201ENST00000547384 544 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AL135978.1-201ENST00000553618 1266 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC106791.2-201ENST00000604680 391 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 MIR6885-201ENST00000612241 66 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 AC211486.4-201ENST00000621495 113 ntBASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
PDZRN3Q9UPQ7 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 OR52K3P-202ENST00000641797 1729 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 MIR99A-201ENST00000384906 81 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 MIR187-201ENST00000385062 109 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 LDHAP5-201ENST00000394996 622 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AL021331.1-201ENST00000402817 582 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 RN7SKP268-201ENST00000411107 316 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC010975.2-201ENST00000427781 588 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC005534.2-201ENST00000431047 433 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC000111.3-201ENST00000433478 193 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 RPS7P2-201ENST00000435134 607 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC114755.4-201ENST00000439114 443 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AL589880.1-201ENST00000448271 287 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC022080.2-201ENST00000452932 533 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC236972.4-201ENST00000458091 963 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC084024.2-201ENST00000503480 791 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC004069.2-201ENST00000505438 1114 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC147055.3-201ENST00000510547 851 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms