Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 HMGN1P5-201ENST00000448591 263 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 RPL7P55-201ENST00000450522 746 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 RN7SL254P-201ENST00000460609 284 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 RPL23AP64-201ENST00000469465 435 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 AP002884.1-201ENST00000479691 655 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC073610.1-201ENST00000489971 396 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 NPM1P28-201ENST00000492269 840 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 HAUS1P1-201ENST00000505275 832 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 MTCO3P27-201ENST00000514397 196 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 IGLV3-6-201ENST00000523937 250 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 CIR1P1-201ENST00000524055 1133 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 TPRX1P1-201ENST00000557620 319 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 BNIP3P35-201ENST00000604530 490 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRFN1Q9P244 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRFN1Q9P244 CLCA3P-203ENST00000490028 2781 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC008432.1-201ENST00000615912 1320 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRFN1Q9P244 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRFN1Q9P244 NEPNP-201ENST00000404786 1371 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRFN1Q9P244 AL353743.3-201ENST00000442109 1468 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 IMMTP1-201ENST00000435590 2219 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 SNORD16-201ENST00000362803 99 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 MIR620-201ENST00000385232 95 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 RNU6-796P-201ENST00000391086 107 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 RNA5SP431-201ENST00000410312 120 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 SNORA79B-201ENST00000410557 148 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 BX664727.1-201ENST00000416024 466 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 MTND2P15-201ENST00000418575 892 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 OR6K4P-201ENST00000423179 955 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 HMGB1P7-201ENST00000450921 612 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 AL139156.3-201ENST00000454802 394 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC021205.1-201ENST00000468797 348 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 RPEP1-201ENST00000504507 658 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC119751.4-201ENST00000507498 357 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC133963.2-201ENST00000513686 578 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 ZNF519P4-201ENST00000514008 125 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC106800.2-201ENST00000514009 1103 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC002310.3-201ENST00000569728 723 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LRFN1Q9P244 EIF1P5-201ENST00000585002 234 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC073046.2-201ENST00000604756 527 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC004477.3-201ENST00000614061 590 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms