Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 OR4F13P-202ENST00000560066 2054 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC018809.2-201ENST00000602436 3823 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 QRSL1P1-201ENST00000400977 1540 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AC083899.1-201ENST00000454465 3819 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 SNORA5.1-201ENST00000384275 131 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 U3.28-201ENST00000391249 210 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 NIFKP3-201ENST00000417799 865 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AC009784.1-201ENST00000426484 460 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 MGAT2P2-201ENST00000427194 797 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AL359265.1-201ENST00000440296 795 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 EIF5AP4-201ENST00000441206 465 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 RPL29P23-201ENST00000486188 442 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AC113367.2-201ENST00000505749 160 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 IGLV3-30-201ENST00000524362 298 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 uc_338.29-201ENST00000615099 168 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AC021766.1-201ENST00000624404 741 ntBASIC5.38□□□□□ -1.55
VAPAQ9P0L0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.38□□□□□ -1.55
VAPAQ9P0L0 HSPD1P9-201ENST00000420325 1636 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AC006484.1-201ENST00000435086 1884 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 RNFT1P3-201ENST00000340898 1052 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 RN7SKP146-201ENST00000410242 334 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 GPS2P1-201ENST00000411761 986 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AC007383.1-201ENST00000445875 636 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 OR52I1-201ENST00000450052 1050 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AC112484.3-201ENST00000505910 329 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AC074255.1-201ENST00000511259 501 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 PRMT5P1-201ENST00000514351 598 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 RN7SKP253-201ENST00000516424 309 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AC009879.1-201ENST00000520029 839 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 CASP1P2-201ENST00000526830 1258 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 OR4A43P-201ENST00000532938 908 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AC122688.1-201ENST00000541494 223 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AGGF1P7-201ENST00000562369 913 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 MIR4776-2-201ENST00000580204 80 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 RN7SL230P-201ENST00000580835 303 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 COX6CP7-201ENST00000597056 208 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AC002069.2-201ENST00000603580 883 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 AL162574.1-201ENST00000615702 950 ntBASIC5.37□□□□□ -1.55
VAPAQ9P0L0 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VAPAQ9P0L0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms