Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RNU1-65P-201ENST00000363919 148 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 RNA5SP431-201ENST00000410312 120 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 RNGTTP1-201ENST00000420965 728 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 AC242426.1-201ENST00000435270 960 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 VN1R110P-201ENST00000438988 971 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 AC073072.2-201ENST00000447425 348 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 OR7E116P-201ENST00000448529 957 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 MEMO1P4-201ENST00000453590 386 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 CST12P-201ENST00000457644 362 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 AC005165.2-201ENST00000466070 380 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 RN7SL193P-201ENST00000491708 276 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 EIF4E2P2-201ENST00000492033 736 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 RN7SL57P-201ENST00000493687 290 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 OR2A3P-201ENST00000493774 953 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 AC006512.2-201ENST00000543250 486 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 LYARP1-201ENST00000436977 1501 ntBASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRRC40Q9H9A6 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AL354890.1-201ENST00000413730 346 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AL354868.1-201ENST00000417077 482 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AMYP1-201ENST00000440059 1023 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 YRDCP3-201ENST00000456507 480 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC104849.1-201ENST00000462623 405 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 RN7SL284P-201ENST00000498823 275 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 GLUD1P3-202ENST00000508551 200 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 KCTD9P6-201ENST00000522306 950 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 PCNAP4-201ENST00000532690 730 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC084824.2-201ENST00000548906 345 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC016839.1-201ENST00000578162 867 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC022400.9-201ENST00000623633 273 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 PDZK1P1-202ENST00000425209 1350 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 DDX18P6-201ENST00000450119 1997 ntBASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.87□□□□□ -1.47
LRRC40Q9H9A6 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 CAP1P2-201ENST00000417455 1409 ntBASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 AC087752.1-201ENST00000391360 558 ntBASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 RN7SKP29-201ENST00000410957 272 ntBASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.86□□□□□ -1.47
LRRC40Q9H9A6 AC093166.4-201ENST00000457867 318 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms