Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC025470.1-201ENST00000510053 2032 ntBASIC7.05□□□□□ -1.28
RPAP1Q9BWH6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RPAP1Q9BWH6 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.05□□□□□ -1.28
RPAP1Q9BWH6 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RPAP1Q9BWH6 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RPAP1Q9BWH6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 ZNF402P-201ENST00000404435 3100 ntBASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AL033543.1-201ENST00000623440 13454 ntBASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 Z95114.1-201ENST00000624264 14574 ntBASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AC138907.8-201ENST00000623981 2256 ntBASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 OR2AT2P-201ENST00000413438 905 ntBASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AL603882.1-201ENST00000463059 681 ntBASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 snoU109.5-201ENST00000516231 132 ntBASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 TXNP4-201ENST00000575018 310 ntBASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AL691477.1-201ENST00000624398 162 ntBASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RPAP1Q9BWH6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 FBXL21-201ENST00000297158 1305 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 U3.10-201ENST00000364459 214 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 MIR937-201ENST00000401271 86 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 FRG2FP-204ENST00000453982 852 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 OSTCP1-201ENST00000455507 450 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 AC090058.1-201ENST00000498788 435 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 AL121594.2-201ENST00000541658 472 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 FO393422.1-201ENST00000603908 708 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 IMMP1LP3-201ENST00000604197 224 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 MIR6719-201ENST00000622428 87 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 OR11H2-202ENST00000641517 1085 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 AC079753.1-201ENST00000623243 3868 ntBASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RPAP1Q9BWH6 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.02□□□□□ -1.28
RPAP1Q9BWH6 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
RPAP1Q9BWH6 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
RPAP1Q9BWH6 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.02□□□□□ -1.29
RPAP1Q9BWH6 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
RPAP1Q9BWH6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
RPAP1Q9BWH6 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RPAP1Q9BWH6 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.02□□□□□ -1.29
RPAP1Q9BWH6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms