Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 RNU6-232P-201ENST00000517144 64 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC020937.1-201ENST00000519677 1013 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC005832.3-201ENST00000537929 631 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 NANOGNBP2-201ENST00000544753 553 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC006530.1-201ENST00000555980 571 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 RN7SL32P-201ENST00000580514 281 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AL022161.1-201ENST00000604390 213 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 CR382285.1-202ENST00000604687 547 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AL163642.2-201ENST00000604722 1019 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AL359757.1-201ENST00000623176 255 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC009120.7-201ENST00000623452 780 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AL161912.4-201ENST00000623889 2468 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 BX322650.1-201ENST00000332359 2143 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC119744.1-201ENST00000454746 1715 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AL589993.1-201ENST00000407450 2524 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 ELL2P3-201ENST00000457883 1602 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 SNORA70.5-201ENST00000365519 135 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 ATP5F1P3-201ENST00000397213 657 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 FTLP19-201ENST00000433300 394 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 ARL4AP3-201ENST00000441452 574 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC002486.2-201ENST00000447806 590 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AL034418.1-201ENST00000448675 860 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 RPL5P24-201ENST00000463742 885 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AP005902.2-201ENST00000518393 307 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 RPL10P18-201ENST00000519384 309 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC008562.1-201ENST00000521763 330 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 OR5M6P-201ENST00000530227 937 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 NDUFAF4P1-201ENST00000559425 519 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC090616.2-202ENST00000584248 222 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AL358072.1-201ENST00000604156 575 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC245008.1-201ENST00000608123 476 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC069209.1-201ENST00000619282 651 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC091931.1-201ENST00000623488 728 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 MIR193BHG-214ENST00000641765 509 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms