Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC006530.1-201ENST00000555980 571 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AC096996.1-201ENST00000563813 325 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AC005244.1-201ENST00000582566 339 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AC005828.7-201ENST00000607331 556 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 HSPD1P9-201ENST00000420325 1636 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AF287957.1-201ENST00000607368 1595 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.78□□□□□ -1.65
HDHD3Q9BSH5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 QRSL1P1-201ENST00000400977 1540 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AL034417.1-201ENST00000399343 800 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 MRPL53P1-201ENST00000414323 319 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 NIFKP3-201ENST00000417799 865 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 THEM7P-201ENST00000419556 672 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AC009506.2-201ENST00000420635 840 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 Z82198.3-201ENST00000421145 199 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 MRPS21P2-201ENST00000424704 264 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AC009784.1-201ENST00000426484 460 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 LINC02210-201ENST00000444561 288 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AC097463.1-201ENST00000447288 481 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 RN7SL57P-201ENST00000493687 290 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AGGF1P7-201ENST00000562369 913 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 OR1E3-201ENST00000575608 948 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 RN7SL230P-201ENST00000580835 303 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AL136131.3-201ENST00000607600 188 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AC108673.3-201ENST00000609183 335 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AC009950.2-201ENST00000636548 183 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AC139426.3-201ENST00000605648 2059 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 AC144833.1-201ENST00000567953 4089 ntBASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HDHD3Q9BSH5 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC027088.4-201ENST00000611559 1947 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 OR4F13P-202ENST00000560066 2054 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 MIR133A2-201ENST00000347538 102 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 RNA5SP500-201ENST00000364486 119 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 SNORA5.1-201ENST00000384275 131 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 RBBP4P5-201ENST00000398583 1266 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms