Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 OTX2P1-201ENST00000450956 354 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 AC002075.1-201ENST00000457396 676 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 RN7SL352P-201ENST00000466002 277 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 AC005532.2-201ENST00000467154 373 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 AC100832.1-201ENST00000471945 383 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 RN7SL583P-201ENST00000475692 287 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 AC024558.1-201ENST00000505008 528 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 HIGD1AP14-201ENST00000507617 282 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 MTCO3P42-201ENST00000509488 518 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 MTCO3P39-201ENST00000514812 518 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 CDC42P3-201ENST00000518493 633 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 MRPS16P1-201ENST00000523462 412 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 KCTD9P4-201ENST00000526766 1166 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 OR4A42P-201ENST00000531397 938 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 AC005840.5-201ENST00000619166 599 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 MIR8080-201ENST00000622224 89 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RAD9AQ99638 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.32□□□□□ -1.4
RAD9AQ99638 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.32□□□□□ -1.4
RAD9AQ99638 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RAD9AQ99638 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RAD9AQ99638 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RAD9AQ99638 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RAD9AQ99638 AC114786.1-201ENST00000512892 1415 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 SRRM1P3-201ENST00000426911 2678 ntBASIC6.32□□□□□ -1.4
RAD9AQ99638 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RAD9AQ99638 AL451142.1-201ENST00000375867 775 ntBASIC6.31□□□□□ -1.4
RAD9AQ99638 RNU6-167P-201ENST00000384292 106 ntBASIC6.31□□□□□ -1.4
RAD9AQ99638 MIR585-201ENST00000384887 94 ntBASIC6.31□□□□□ -1.4
RAD9AQ99638 RN7SKP216-201ENST00000411050 312 ntBASIC6.31□□□□□ -1.4
RAD9AQ99638 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.31□□□□□ -1.4
RAD9AQ99638 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.31□□□□□ -1.4
RAD9AQ99638 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.31□□□□□ -1.4
RAD9AQ99638 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.31□□□□□ -1.4
RAD9AQ99638 EEF1B2P5-201ENST00000444820 548 ntBASIC6.31□□□□□ -1.4
RAD9AQ99638 RAB28P2-201ENST00000454299 641 ntBASIC6.31□□□□□ -1.4
RAD9AQ99638 LDHBP2-201ENST00000456969 1005 ntBASIC6.31□□□□□ -1.4
RAD9AQ99638 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.31□□□□□ -1.4
RAD9AQ99638 EIF1P7-201ENST00000487533 337 ntBASIC6.31□□□□□ -1.4
RAD9AQ99638 RPL23AP40-201ENST00000487630 390 ntBASIC6.31□□□□□ -1.4
RAD9AQ99638 OR4A46P-201ENST00000527255 933 ntBASIC6.31□□□□□ -1.4
RAD9AQ99638 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.31□□□□□ -1.4
RAD9AQ99638 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.31□□□□□ -1.4
RAD9AQ99638 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.31□□□□□ -1.4
RAD9AQ99638 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.31□□□□□ -1.4
RAD9AQ99638 AL390318.1-201ENST00000624564 687 ntBASIC6.31□□□□□ -1.4
RAD9AQ99638 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RAD9AQ99638 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.31□□□□□ -1.4
RAD9AQ99638 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.31□□□□□ -1.4
RAD9AQ99638 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.31□□□□□ -1.4
RAD9AQ99638 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RAD9AQ99638 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAD9AQ99638 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RAD9AQ99638 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.3□□□□□ -1.4
RAD9AQ99638 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAD9AQ99638 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RAD9AQ99638 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
RAD9AQ99638 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.3□□□□□ -1.4
RAD9AQ99638 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RAD9AQ99638 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAD9AQ99638 AL022323.4-201ENST00000623980 13120 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RAD9AQ99638 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.3□□□□□ -1.4
RAD9AQ99638 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAD9AQ99638 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.3□□□□□ -1.4
RAD9AQ99638 AL133270.1-201ENST00000402635 279 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 RMRPP5-201ENST00000411156 267 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 Y_RNA.625-201ENST00000411256 107 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 RPL23AP27-201ENST00000415161 451 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 PTCD2P2-201ENST00000415579 1095 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.3□□□□□ -1.4
RAD9AQ99638 AL139148.1-201ENST00000427122 680 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.3□□□□□ -1.4
RAD9AQ99638 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.3□□□□□ -1.4
RAD9AQ99638 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.3□□□□□ -1.4
RAD9AQ99638 CNOT7P2-201ENST00000441051 832 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 VN1R96P-201ENST00000446052 858 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 AL645937.3-201ENST00000453647 936 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 RPS27AP3-201ENST00000453803 454 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 RN7SL172P-201ENST00000460535 303 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 RPL17P2-201ENST00000491913 451 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 AC008953.1-201ENST00000497334 318 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 AC092593.2-201ENST00000513866 913 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.3□□□□□ -1.4
RAD9AQ99638 TXNP4-201ENST00000575018 310 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 AC115989.2-201ENST00000578640 563 ntBASIC6.3□□□□□ -1.4
RAD9AQ99638 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms