Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 RN7SL492P-201ENST00000460700 295 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 RPS20P4-201ENST00000461659 355 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 RPS26P11-201ENST00000463445 348 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 RPS26P6-201ENST00000475156 348 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC112225.1-201ENST00000508230 297 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC096661.1-201ENST00000515870 822 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 MTCO3P15-201ENST00000526563 574 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC007537.1-201ENST00000539347 327 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC095057.3-201ENST00000567102 1157 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 MIR3915-201ENST00000578518 97 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC008759.1-201ENST00000589783 983 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC010463.3-201ENST00000594077 500 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 VN1R90P-201ENST00000595717 726 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC067773.1-201ENST00000603284 1094 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC092653.1-201ENST00000608509 531 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AL355073.2-201ENST00000612106 557 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 FP325313.1-201ENST00000638228 703 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 ZNF663P-202ENST00000641770 1131 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC027514.1-201ENST00000588561 1603 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AL512353.3-201ENST00000417517 1326 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 FAM3C2-201ENST00000312214 681 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 RNA5SP176-201ENST00000390956 110 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 RN7SKP166-201ENST00000410812 305 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC098592.1-201ENST00000419352 333 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC244035.1-201ENST00000430042 390 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 PSMD8P1-201ENST00000436275 769 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AL096803.1-201ENST00000456921 1021 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 RPL5P13-201ENST00000462840 709 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 RPS14P8-201ENST00000478778 369 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC025459.1-201ENST00000504072 156 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC010424.1-201ENST00000506336 297 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 SCARNA11.1-201ENST00000516918 132 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 CARSP2-201ENST00000520688 277 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 GTF2IP11-201ENST00000526931 420 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 PHBP2-201ENST00000532859 806 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AL121839.1-201ENST00000556233 1185 ntBASIC6.53□□□□□ -1.36
PTCHD1Q96NR3 AL109628.1-201ENST00000556877 366 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms